Clostridium sp. MD294: C820_002259
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Entry
C820_002259 CDS
T10174
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clod Clostridium sp. MD294
Pathway
clod00260
Glycine, serine and threonine metabolism
clod00460
Cyanoamino acid metabolism
clod00630
Glyoxylate and dicarboxylate metabolism
clod00670
One carbon pool by folate
clod00680
Methane metabolism
clod01100
Metabolic pathways
clod01110
Biosynthesis of secondary metabolites
clod01120
Microbial metabolism in diverse environments
clod01200
Carbon metabolism
clod01230
Biosynthesis of amino acids
clod01240
Biosynthesis of cofactors
clod04981
Folate transport and metabolism
Module
clod_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C820_002259 (glyA)
09102 Energy metabolism
00680 Methane metabolism
C820_002259 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C820_002259 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C820_002259 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C820_002259 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C820_002259 (glyA)
Enzymes [BR:
clod01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C820_002259 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
USF30815
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All DBs
Position
complement(2284034..2285269)
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AA seq
411 aa
AA seq
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MLDFSEIQKVDAAVADAIAQELERQQHNIELIASENVVSKAVMFAMGTPLTNKYAEGYPA
KRYYGGCEKVDIVENIAKDRAKELFKCDHVNVQPHSGSQANMAVYFAMLKPGDTVLGMNL
DQGGHLTHGSTVNISGKYFNFISYGVDSNGILDYEQLHRLAKEHKPKMIVAGASAYARII
DFERIGNIAKEVGAYYMVDIAHIAGLVAAGLHPSPVPYADFVTTTTHKTLRGPRGGMIMC
KEQYAKEIDKAIFPGIQGGPLMHIIASKAVCFKEALEPSFKQYCKQVIENASVLSKTLIE
NGIPIVSGGTDNHLMLADLSSLNITGKEAEKILDEVGITVNKNTIPNDPQSPFVTSGIRI
GTPAVTSRGMNENDMKEIGEVIALALKDFDKNKNEVAKRVRALTDKYPLYQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttagattttagcgaaatacaaaaagtagatgctgctgtagcagatgctattgcacaa
gaattagaacgccaacaacacaatatagaattgattgcttctgaaaatgttgtttctaaa
gcagttatgtttgctatgggaacacctcttacaaataaatatgcagaaggctatccagca
aaacgttattatggtggttgtgaaaaagtagatattgtggaaaatattgcaaaagacaga
gcaaaagaactttttaaatgcgaccatgtaaatgtacaaccacattctggttcacaagca
aatatggcagtttattttgctatgcttaaaccgggagatactgtacttggtatgaattta
gaccaaggaggacatttaacacatggcagtactgtaaatatttcaggaaaatatttcaat
tttatttcttatggtgtagatagcaatggcatattagattatgaacaattacaccgtttg
gcaaaagaacacaaaccgaaaatgattgtagctggagcaagtgcttatgcaagaataatt
gactttgaaagaattggaaatattgccaaagaagtaggagcatattatatggtagatatt
gctcatattgcaggattagtagcagcaggattacacccatcaccagtaccatatgctgat
tttgtaactactacaacacataaaacgcttagaggccctagaggcggtatgattatgtgc
aaagagcagtatgcaaaagaaattgacaaggcaatttttccaggaatacaaggcggccct
ttaatgcacattattgcttctaaagcagtttgttttaaagaagcattagaaccttctttt
aaacaatattgtaaacaagttattgaaaatgcttccgtattatcaaaaacactgatagaa
aatggtatacctattgtttcaggtggtacagataatcatttgatgttggcagatttatcc
agtttgaatattactggaaaagaagcagaaaaaatattagatgaagtaggcatcacagtc
aataaaaatacgataccaaatgacccacaatctccttttgtaacaagtggtatacgcatt
ggaacaccagcagtaacatcgaggggtatgaatgaaaatgatatgaaagaaattggagaa
gtgattgcacttgcattaaaagattttgataaaaataaaaatgaagttgcaaaaagagtg
cgtgctttaacagacaaatatccattataccaataa
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