Condylostylus longicornis: 129613344
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Entry
129613344 CDS
T09756
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
clon
Condylostylus longicornis
Pathway
clon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129613344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clon03021
]
129613344
Enzymes [BR:
clon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129613344
Transcription machinery [BR:
clon03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129613344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
ArsC
Motif
Other DBs
NCBI-GeneID:
129613344
NCBI-ProteinID:
XP_055383331
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MGATFKEFDLVPTDLEFSIYSSDEIKSLSVVKIITGLTFNQLGHALPGGLYDSAMGVSGK
VFEVCQTCMGQSNCPGHFGHIELNTVVYNPFFIKLAHDILKISCLNCNRLQFKEQHLNIL
KLQLQLIDAGFVIEAQQIDIFKSEVVLAASTEKNVKTESGTEMHPEIAKMHEILNRGETN
KINCTKTSNEIRSQIINAFLHSFAGNKCLYCHNPLRKIRFVYRKLMIYMPKTELRNLKET
EAGNNEDKGKDSSSPNKVVFANECQDYLRKIFKENSEILQEIFPIFKIASNSLYSPVDIF
FMDTILVTPPSARPCNYLHNEIVEHPQTAVYRSILESNSVLRLIMLNIQKGEEELKDEAK
AVYQKAQGSNAHEKLYYAIQELQTCVDQLLDINLGRENTKSFGLKQVLEKKEGLIRKHMM
GKRVNYAARTVITPDPNINVEELGVPDIFAKKLSYPVPVTSWNCSELRKMVINGPDIHPG
ANYIVDPKGHKILIPANDPAKRESLAKLLFRNPENGISVVHRHLLNGDIMLLNRQPTLHR
PSIMAHKARILQGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARAEAYGLANVANHY
LVPKDGTPLGGLIQDHIISGVKLSVRGRFFNREDYHQLVFQGLSDLKGDIKLLPPAIMKP
IRLWSGKQILSTIILNLIPEGYPGINLTSSAKVGAKHWITAPKHDWIHGGTPLKDIEMSE
SEVIIRNCELLVGILDKQQYGATEFGLVHCMYELYGGHVSSSLLTSFTKLFTVFLQNEGF
TLGVKDILVTPEADKKRRKIIKESRQVGMSIVAEALELQDVPDLSDLASKIEAAYLENPK
FRTILDRKYKSILDEYTNQINQVCLPKGLISHFPFNNLQLMVLSGAKGSMVNTMQISSLL
GQIELEGKRPPLMISGKSLPSFPSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLI
DTAVKTSRSGYLQRCLIKHLEGINVSYDLTVRDSDNSVVQYLYGEDGLDVSKSRYLNLKS
IKFLDENAAAILHRAQINNLEDENSLEKIHKHNKKLKSWRKKNGNPTEKRRCSSFQQFSS
ELREEIEMKKPNKMSKKSGRLNIDAKLVELWKKADNKDKYHKKYSHCPDPVISKYKPDNY
YGAITEYVENLMNTYLQNNLERKSTIRDVFYTKNITSIVEPGEPVGLLAAQSIGEPSTQM
TLNTFHFAGRGEMNVTLGIPRLREILMLASSKIKTPSMDIPFLKNRTKKAEKLRIKLNRV
TLSEVLESINVKIRLILRPVRVYEYKLKFSFLPKEAYEDEFCVKPKQILKFMDEHFFKMM
FKLIKRNRYSKDLIEISTETENSKQKDDDIDEQVADKDDQKGSKNAGPAIEIDDSSDDDF
DEDDATGVKLKAKKQDENDYEDPDEVEEIEDADYNEDNESVNLDNENDKNENEDDDNKEE
FIVTSNEMVKNYIYDKENYRWCQLTFNLAMKDKIVDISTLLKNLAEKSVVYEVPKIKRAI
TYTNNDDLILKTDGINIVEMFKYNQILDLNRLYSNDIHAIANTYGIEAATRVIVKEIQNV
FKVYGITVNPRHLLLVADYMTFDGIFKPLSRKGMEFSSSPLQQMSFESSLKFLKDAAISG
RTDELNSPSSRLMVGLPVKNGTGSFTLLNKYV
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaaccttcaaagaattcgatttagtaccgacagacttggaattttctatttat
tcgtcagatgaaataaaatctctaagtgttgttaaaattattacaggattaacattcaat
caacttggtcatgcattacctggcggattatacgattcagcaatgggagtaagcggtaag
gtttttgaagtttgtcaaacatgtatgggacaatccaactgccctggtcattttgggcac
attgaattaaatacggtagtctataatcccttcttcataaagctagcacatgacatatta
aaaatttcatgcctcaattgtaatagattgcagtttaaagaacaacatttgaatattcta
aaattgcaactgcaattaatagatgctggtttcgtaatagaagcgcaacaaattgatatt
ttcaaatcggaagtagttctggcagcatcaacagagaaaaatgtgaaaacagaaagtggg
acggaaatgcatcccgaaattgctaaaatgcatgaaattttaaatcgaggagaaacaaat
aaaattaattgcactaaaacttcaaatgagattaggtcccaaatcataaatgcattctta
catagttttgcgggaaacaaatgcttatattgtcataaccctttaagaaaaattagattt
gtatatcgtaaactaatgatatatatgccgaaaaccgaacttagaaatttaaaggaaact
gaggcaggaaataatgaagataaaggtaaagacagttcttcaccaaataaagtggttttt
gctaatgaatgtcaagattacctgcgaaaaatatttaaagaaaattcagaaatccttcaa
gaaatattcccaattttcaaaattgcttcaaattcgctgtacagtcctgttgacatattt
ttcatggatactattctcgttacaccaccgagtgcaagaccttgtaattatctacataat
gaaatagttgaacatccacaaacagctgtctataggtcaattttagaatcaaatagcgtt
ttacgtttaataatgttaaatatacaaaagggtgaagaggaattaaaagacgaagctaaa
gctgtatatcaaaaagctcaaggttcaaatgcgcatgaaaaactctactatgctattcaa
gaacttcaaacttgtgttgatcaactgctagacataaatttgggtcgtgaaaatacaaaa
tctttcggtttgaaacaagttttagaaaagaaagaaggacttattcgaaaacatatgatg
ggaaaaagagtcaattatgctgctcgtacagttatcactcctgatcctaatattaatgtt
gaagagcttggagttccagatatatttgcaaaaaaattatcataccctgttccagtgact
tcatggaactgttctgagcttagaaaaatggttataaacggccccgatattcatcctggt
gcgaattacatcgtagatccgaaaggacataaaattttaattccagcaaatgatccagca
aaacgggaaagtttggccaaattactttttagaaatccagaaaatggtattagtgtagtt
catcgccatttattgaatggtgatatcatgttacttaaccgacaaccgacacttcatcga
ccaagtatcatggctcataaagcccgaatattacagggagagaaaacatttcgattgcat
tattctaattgcaaagcttataatgctgatttcgatggtgacgaaatgaatgcacatctt
ccacaaagtgaagtagctagagcagaggcatatggtttggccaacgtggctaatcactat
ttggttccaaaagatggaactcccttgggtggattgattcaggatcatataatatcggga
gtaaaactgtctgtgcgtggaagattttttaatcgtgaagattatcatcaactggtattc
caagggttatccgatttaaagggagatattaaattacttcctccagctattatgaagccg
atacgtctctggtctggaaaacaaattctttcaacaattattcttaatttaataccggag
ggctaccctggaataaatctaacttcatccgccaaagtaggagctaagcattggattaca
gctccgaaacacgactggatacacggagggacaccattaaaagatattgaaatgtctgaa
agtgaagttataattcgcaactgtgaacttttagttggaattttggataaacaacaatat
ggagctacagaatttggtcttgtgcactgtatgtatgagctttatggcggacacgtttcc
agcagtttgttgacttcatttacaaaattatttactgtattcttacaaaacgaaggcttc
acgcttggagttaaagatatattagtgactccggaagcagataagaaacgacgaaaaatt
atcaaagaaagtcgtcaagtgggaatgtcaattgtagccgaagcgttagaattgcaagac
gttcctgatttaagtgatttagcaagcaaaatcgaagcagcatatctggaaaatcctaag
tttaggactatattagaccgaaaatataaatccatattggatgaatatacaaatcaaatc
aatcaagtttgtctaccaaaaggcttaataagtcattttcctttcaacaatttgcaatta
atggtattatccggggctaaagggtctatggtaaatactatgcaaatttcaagcttgttg
gggcaaatcgaattggaaggtaaaagaccgccgttaatgatatcgggaaaatcattacca
agtttcccatcatttgaaacatccccaaagtcaggaggttttattgatggaagatttatg
accggtatccaacctcaagattttttctttcattgtatggctggtcgagaaggtttaatc
gatactgctgtaaaaacaagccgatcaggttatttgcaacgttgtttaataaaacatttg
gaaggaatcaatgttagttacgacttaacagttcgggatagtgacaatagtgtcgtacaa
tatttatatggagaagacgggttagacgtatctaaatcacgttatttaaatttgaaatca
attaagtttcttgacgaaaatgcagcagcaatactacatcgtgctcaaataaacaatctt
gaagatgaaaactctttagaaaagattcataaacataataaaaaattaaaatcttggcga
aaaaagaatggtaacccaacagaaaaacgaagatgttcaagttttcaacagttttcttct
gaattacgtgaagaaattgaaatgaagaaacccaataaaatgtcaaaaaaatcaggtcgc
ttaaatattgatgcaaaattagtagaactttggaaaaaagcagataataaagacaaatat
cataaaaaatattctcattgtcccgatccggtaatatcaaaatataaaccagacaattat
tatggagcaataactgaatatgtggagaatttaatgaatacatatcttcaaaataatctg
gaaagaaagtcaacaattcgtgatgtattttataccaaaaatataacatcaatagtagaa
cctggagaacctgtgggtttattggcagctcaatctattggtgaaccttcaactcaaatg
acattgaatacatttcactttgctggtcgtggtgaaatgaatgttacattaggtatacca
cgtttaagagaaattttaatgttggcatcatcaaaaattaagactccatcaatggatata
ccattcttaaaaaatcgaactaaaaaagcagaaaagttacgaataaaattaaatcgtgta
acattatctgaagttttagaaagtatcaatgtaaaaattcgtctaattttaagaccagtt
agagtttatgaatataaactgaaattttccttcttaccaaaagaagcttatgaggatgaa
ttttgtgttaaacctaagcaaatcttaaaatttatggatgaacatttcttcaaaatgatg
ttcaagttaattaaaagaaatcgatacagcaaggatttaattgaaatttctactgaaact
gaaaatagtaaacaaaaggatgatgatattgacgaacaagtagctgacaaagatgatcaa
aaaggatcaaaaaatgctggaccagcaatagaaatagatgactcttctgatgacgatttt
gatgaagatgatgcgactggtgttaaattaaaagctaaaaagcaggatgaaaatgattat
gaagatccagatgaagtagaagaaattgaggacgcagattataatgaagataatgaatcc
gtaaatcttgataatgaaaatgacaagaatgaaaatgaagatgacgacaacaaagaggaa
tttatagtgacgagcaatgaaatggtcaaaaattatatatatgataaggaaaactataga
tggtgccagttaacatttaaccttgcaatgaaagacaaaattgtcgatatttcaacatta
ttaaaaaatttagctgaaaaatcagttgtttatgaagtgccaaaaattaaaagagccatt
acatacacaaataatgatgatttaatattaaaaaccgatggaattaatattgttgaaatg
tttaaatataatcaaatattggatttaaatcgtttatattcaaatgatattcatgctatt
gcaaatacttatggtattgaagctgcaactagagttatagttaaagaaatacaaaatgta
tttaaagtctatggtattactgttaatccaagacatttattattggtagctgattatatg
acttttgatggaatatttaaaccattaagtcgtaaaggaatggaattttcatcatcaccc
ttacaacaaatgtcatttgaatcttctttgaaatttttaaaagatgctgctatatctggt
cgcactgacgaattaaattcaccaagtagtcgacttatggttggtttacctgttaaaaat
ggaactggatcatttactttattaaataaatatgtt
DBGET
integrated database retrieval system
