Clostridium sp. AWRP: DMR38_06230
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Entry
DMR38_06230 CDS
T07742
Symbol
sigE
Name
(GenBank) RNA polymerase sporulation sigma factor SigE
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
clos
Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clos03021
]
DMR38_06230 (sigE)
Transcription machinery [BR:
clos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMR38_06230 (sigE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_31
Sigma70_r4_2
HTH_19
HTH_23
MarR_2
Phage_CII
HTH_37
KORA
HTH_17
HTH_28
HNF-1_N
GerE
Motif
Other DBs
NCBI-ProteinID:
AZV56229
UniProt:
A0A3T0LUI6
LinkDB
All DBs
Position
1344072..1344779
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AA seq
235 aa
AA seq
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MLRLKILLNRILTKFKFAIKNIYYIGGNDVLPPPLSKKEEEDLVLKLVSGDEKVRSTLIE
RNLRLVVYIARKFENTGVNVEDLVSVGTIGLIKAVNTFNPEKKIKLATYASRCIENEILM
YLRRNSKTKAEISFYEPLNIDWDGNELLLSDILGTDNDVVYNFIEDEVDKQLLMLAMKKL
SDREKEIVNLRFGLNGKSEKTQKEVADLLGISQSYISRLEKRIIKRLRKEINKML
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggttaaaaatattgttgaacagaatacttacaaaatttaaatttgcaataaaa
aatatatattatatagggggaaatgatgtactaccacctccacttagcaaaaaagaagaa
gaagatttggttttgaagttagtttctggagatgagaaggtaagatctactcttatagaa
agaaatttacgtttggtagtttatatagctagaaagtttgaaaatacaggggtaaatgtg
gaagatttagtatcagtaggtaccataggacttataaaagcagtaaatacatttaatcct
gagaaaaaaataaaattagctacttatgcttctagatgtatagaaaatgaaatactcatg
tatctgagaagaaatagtaaaacaaaggcagaaatttctttttatgaaccactcaacata
gattgggatggaaatgaattattgctttctgatattttaggaacggacaatgacgtagtt
tacaattttatagaagatgaagtggataagcagcttctaatgctagccatgaaaaaatta
agtgacagagaaaaggagatagttaatctaaggtttggattaaatggcaaaagtgaaaaa
actcagaaagaagttgcagacttacttggaatatcacaatcttatatatcaaggcttgaa
aagagaataataaagagacttagaaaagaaataaataaaatgttatag
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