KEGG   Campylobacter lari RM16701: UPTC16701_1193
Entry
UPTC16701_1193    CDS       T03550                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
clr  Campylobacter lari RM16701
Pathway
clr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UPTC16701_1193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clr03019]
    UPTC16701_1193
Messenger RNA biogenesis [BR:clr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     UPTC16701_1193
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 KH_PNO1_2nd KH_2 dUTPase KH_KhpA-B MurD-like_N
Other DBs
NCBI-ProteinID: AJD05225
LinkDB
Position
1176460..1178013
AA seq 517 aa
MIEILVALIAVFIGGGIGYIVAKKINDANFNIFLEQAKAKAKAIEYEAELTLKDAKNSVA
EAEFAAKKKFDEKIQKLQKEHSIKLEELNKKEQNLHYQEKLHEENKNKLAKEQQAIKALH
EENENLKQNYETKLSEVLKILEHSAGLTQEEAKNIVLQKVEENSRAEIAHIVRKYEEEAR
NEAKRKANFILAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNVKTLEMVLGVD
IIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRIQPAKIEEIHEKVCKEFEDNILEEG
QTIVMDLGLNNIHPEIVKLIGKLRYRASYGQNALAHSLEVAHLAGIIAAECGGDEKLARR
AGILHDIGKALTHEFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEAISIESAAVCTA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKEGVKKAYAINAGREIRVIVNAKLVNDDE
SALLAKEIAEEIQEKVQYPGEIKVNVIRELRAIDFAR
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgatagaaatattagtcgcattaatagccgtttttataggcggagggattgggtatata
gtcgccaaaaagattaatgatgcaaatttcaatatctttttagagcaagcaaaagcaaaa
gcaaaagccattgaatatgaagctgaactaacacttaaagatgctaaaaattcggttgct
gaagctgaatttgcggcaaagaaaaaatttgatgaaaaaattcaaaaacttcaaaaagag
cattctattaaactagaagagcttaataaaaaagaacaaaatcttcattatcaagaaaaa
cttcatgaggaaaataaaaacaagttagcaaaagaacagcaagctataaaagctttacat
gaagaaaatgaaaatttaaaacaaaattatgaaacaaagcttagtgaagtattaaaaatt
cttgaacattcagctggtcttacacaagaagaagcaaaaaatatagttttacaaaaagta
gaagaaaactcaagagctgagattgcccatattgttagaaaatacgaagaagaagctaga
aatgaagctaaaagaaaggctaactttatcttagcgcaagctacttcaagatttgcagga
gaatttgctgctgaaagattaatcaatgtagtaaatatcaaaaatgatgagctaaaaggt
cgtattataggtaaagaagggagaaatgttaaaaccctagaaatggttttgggtgttgat
attatcatcgacgatacacctggagcgattatagtaagttgttttaatctttatagacgc
gctattgctacaaaagtaattgagcttttagttgaagatggcagaattcaacctgcaaaa
atagaagaaattcatgaaaaagtttgcaaagaatttgaagataatatcttagaagaaggt
caaactatagtaatggatttaggacttaataatatccatcctgaaattgttaaattaata
ggaaaattaagatatagagcaagttatggccaaaatgctctagcacattctttagaagtg
gcacatttagctggaatcatagcagctgagtgtggcggggatgaaaaattagcaagaaga
gctgggattttacacgatataggcaaggctttaacacacgaatttgaaggctctcatgtg
gatttaggagctgaactttgcaaaagatacaaagaacatccggttgtgattaatgcaatt
tatgctcatcatgggcatgaagaagctattagcatagaatcagctgcagtttgtacagca
gatacactaagcgctgcacgccctggagcaagacgtgaagttttagaagccttcttaaaa
agagtgagcgaacttgaagatatagcaaaaagcaaagaaggggttaaaaaggcttatgct
attaatgctggtagggaaattagagttattgttaatgcaaaattagtcaatgatgatgaa
tctgcgcttttagccaaagaaatagctgaagaaattcaagaaaaagtacaatatcctggt
gaaataaaagtcaatgtcatcagagagcttagagctattgattttgcaagataa

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