Canis lupus dingo (dingo): 112641380
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Entry
112641380 CDS
T08371
Name
(RefSeq) antigen peptide transporter 2 isoform X4
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud02010
ABC transporters
clud04145
Phagosome
clud04612
Antigen processing and presentation
clud05163
Human cytomegalovirus infection
clud05168
Herpes simplex virus 1 infection
clud05169
Epstein-Barr virus infection
clud05170
Human immunodeficiency virus 1 infection
clud05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112641380
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112641380
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
112641380
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
112641380
05168 Herpes simplex virus 1 infection
112641380
05163 Human cytomegalovirus infection
112641380
05169 Epstein-Barr virus infection
112641380
09163 Immune disease
05340 Primary immunodeficiency
112641380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clud02000
]
112641380
Enzymes [BR:
clud01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
112641380
Transporters [BR:
clud02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
112641380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
AAA_29
AAA_23
AAA_15
AAA_16
AAA_33
AAA_25
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_18
SRP54
AAA_13
Motif
Other DBs
NCBI-GeneID:
112641380
NCBI-ProteinID:
XP_025274155
Ensembl:
ENSCAFG00020001693
ENSCAFG00020001827
LinkDB
All DBs
Position
12:complement(2469755..2510402)
Genome browser
AA seq
703 aa
AA seq
DB search
MRFPDLRPWAFLLLADWALLWLLQGTLGARLPRGLPGLWLEGTLRLGGLWWLLKVGGLLG
QVGALLPPLCLETPLFLSLRALVPGLLSAPLVGVAAAPWSGRLVGYGAACLSWAMWALLS
SPEAREGEQGQEKNTDLMWRLLRLSWPDLPYLVAAFFFLVVAVLGETVIPYYSGRVIDIL
RGDFNPDAFATAIFFMCLFSIGSSLCAGCRGSCFTFIMSRTNVRVREQLFSSLLRQDLGF
FQETKTGELNSRLSSDTKLMSCWLPLNANVLLRSLVKVVGLYGFMLSLSPRLALLSLLKV
PLAITAEKVYNVRHQAVLREIQNAVAKAGQVVQEAVGGLQTVRSFGAEEHEVCLYKKAVE
RCRQLRWQRDLECALYLLFQRMLHLGMHVLMLNCGRQQIQAGDLTQGGLLSFLLYQEDLG
HYVQTLVYMCGDMLSNIGAAEKVFQYLERKPNLHPPGTLAPPTLQGLVEFQDVSFAYPNC
PDQSVLKGLTFTLRPGQMTVLVGPNGSGKSTVAALLQNLYQPTKGQLLLDGKPLWQYEHG
YLHRQVASVGQEPVLFSGSVRDNIAYGLQSCSDEKVLAAAQAANASSFIQEMEHGLYTDV
GEKGNQLAVGQKQCLAIARALVRDPRVLILDEATSALDVQCEPALQDWKSHGDRTVLVIT
HRLETVQSADQILVLREGELLEHAQILEGQDLYSRLVQQLLED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccctgacctgagaccctgggccttcctgctgctggctgactgggctctgctc
tggctgcttcaggggaccctgggcgctcgccttccccgggggcttccaggcctgtggctg
gaggggaccctgcggcttggggggctctggtggctgctaaaagtgggaggactgctgggg
caggtgggagcgctgctgcccccgctctgcctggagactccgctgttcctctccctgagg
gccctggtcccagggctcctgagcgcccccctagtcggagtggctgcagccccctggagc
gggcggctggtggggtacggggctgcgtgtctgagctgggcaatgtgggctctgctgagc
tccccggaagcccgggagggggagcagggccaggagaagaacacagacttgatgtggagg
ctgctgaggctctcctggccagacctgccttacctcgtcgcagccttcttcttccttgtt
gtcgctgtgttgggtgagacggtcatcccttactattctggtcgtgtcattgatatcctg
agaggtgatttcaaccctgacgcctttgccaccgccatctttttcatgtgcctcttctcc
attggaagctcactgtgtgctggctgccgagggagctgcttcactttcatcatgtccaga
accaatgtgcgggtccgggagcagcttttctcctcccttctgcgccaggaccttggtttc
ttccaggagactaagacaggggagctgaattcaagactgagctcagataccaaattgatg
agctgctggcttcctcttaatgccaatgtgctcttgagaagtctggtcaaagtggtgggg
ttgtatggcttcatgctgagcctgtcacctcgacttgccctcctctctctgctcaaggtg
cctctggcaataactgctgaaaaggtgtacaatgtccgccatcaggcagtgcttcgggag
atccagaatgctgtggcaaaagcaggacaggtggtgcaggaggcagttggagggctgcag
actgtgcgcagttttggggccgaagagcacgaggtctgtctgtataagaaggcggtggag
cgatgccggcagctgcggtggcaacgagacctggaatgtgccctctacttactctttcag
aggatgctgcacttgggcatgcacgtgttgatgctgaattgtggacggcagcagatccag
gctggggacctcacccaaggtgggctgctctcctttctgctctaccaggaggacttgggc
cattatgtgcagaccctggtgtacatgtgtggggatatgctcagcaacataggggctgct
gagaaggtgtttcagtacttggaacgaaagccaaacctgcatcctccggggacgctggcc
cctcccactctgcagggcctggtggaatttcaggatgtctcctttgcatatcccaactgc
cctgaccagtctgtcctcaaggggctgaccttcacccttcgtcctggccagatgacggtg
ctggtggggcccaatgggtctgggaagagcaccgtggctgccctgctgcagaatctgtac
cagcctaccaaggggcagctgctgctggatgggaagcccctctggcagtatgagcatggc
tacctgcaccgacaggtggcttcagtcgggcaggagcctgtgctgttctcaggttctgtg
agagacaacattgcctacgggctgcagagctgcagtgatgagaaggtgctggcagctgcc
caggctgccaacgcatccagcttcatacaggagatggaacatggactatatacagatgta
ggggagaaagggaaccagttggctgtgggacagaaacaatgcctggccattgcccgggcc
ctcgtgcgggacccacgagtcctcatcctggatgaagccaccagtgccctggatgtccag
tgtgagcccgccctgcaggattggaaatctcatggggaccgaacggtgctggtgatcact
cacaggctggagactgtgcagagtgctgaccagatcctggtgctcagggagggagagctg
ctagagcatgcacagatcttggaggggcaagacctctattcccgcctggtgcagcagcta
ctggaggactga
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