Canis lupus dingo (dingo): 112669382
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Entry
112669382 CDS
T08371
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04360
Axon guidance
clud04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
112669382 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
112669382 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clud04040
]
112669382 (TRPC4)
Ion channels [BR:
clud04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112669382 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
112669382
NCBI-ProteinID:
XP_025318206
Ensembl:
ENSCAFG00020021443
LinkDB
All DBs
Position
25:2869882..3078107
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AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKFSTVQSAQASKEPSNSA
DSDEKSDNEGSSKDKRKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRK
VNFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEVTRQQAERPLERNIQLESRGLASRG
DLNIPGLSEQCILVDHRERNTDCLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDS
SIDYDVNLTDTVTHEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaaggaatgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcagaatcggaactctctccatcagaaaaagcctacttaaatgcggtg
gaaaagggagattatgcaagtgtcaagaaatctctggaggaagctgaaatttattttaaa
atcaacattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcattgaactgcttttaagcttcaatgtctacgttggagatgctctg
ttgcatgctatcaggaaagaagtcgtcggagctgttgaactgttactgaaccacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttttctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattacgagataataaagctt
ttagttcagaaaggagtctctgtgcccagaccccatgaggtccgctgtaactgtgtggaa
tgcgtgtccagctcggacgtggacagcctccgccactcacgctccagactcaacatctac
aaggccttggccagcccctcgctcattgcactatcaagtgaagacccttttctcacagcc
tttcagctaagttgggagcttcaggaactgagtaaagtagaaaacgaattcaagtcggaa
tatgaggagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agttccagagaactggaaatcattctcaattacagagatgacagtagtctcatagaagaa
caaagtggaaatgatctcgcaagactcaaattggccataaagtaccgtcaaaaagagttt
gttgctcaacccaattgtcaacaactgcttgcgtctcgctggtacgatgagttcccaggc
tggaggagacgacactgggcggtgaagatggtgacatgtttcataataggacttcttttt
cccgtcttctctgtgtgctaccttatagctcctaaaagcccactgggactgttcatcaga
aagccatttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaagcaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacaatctctttgaaaattgttgcgtttgtaaagtacagc
gcacttaatccacgggaatcttgggacatgtggcatcccacgctggtggctgaagcttta
ttcgccatcgcaaacatcttcagttccttgcgcctgatctcgctgtttacggcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctagacattttgaagtttcta
ttcatatactgcctagtgttgctagcgtttgcaaatggcctaaatcaattgtatttctat
tacgaagaaacaaaagggttaagctgtaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttgtttgagacactccagtccctgttttggtcaatttttgggctgatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcacagagtttgttggtgccaccatg
tttgggacgtacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataattcttaccaactcattgcagaccatgcggatatagaatggaaatttgctcgaaca
aagctttggatgagttatttcgaagaaggaggtactctaccaacacctttcaatgtcatc
ccgagccccaagtctctctggtacctaatcaaatggatctggacacacttgtgcaagaaa
aagatgagaagaaagcctgaaagttttggaacaataggggtaagaacacagcataggcgg
gctgctgataatttgaggagacatcaccaatatcaagaggtcatgaggaacctggtgaag
cgatacgttgctgcaatgatcagagatgccaaaactgaagaaggtttgacagaagagaac
tttaaggaactaaagcaagacatttccagtttccgctttgaagtcctgggtttactacga
ggaagcaaattctcgacggtacagtcagctcaggcttcgaaggagccctccaattccgcc
gactccgatgaaaagagtgataatgaaggtagtagcaaggacaagagaaagaacttcagc
ctgtttgatttaaccactctgattcacccccgatcagcagcaattgcctccgaaagacac
aacatcagcaatggctctgccctggtggtgcaagagccccccagggagaagcagagaaaa
gtgaattttgtgaccgatataaaaaattttgggttgtttcatagacgatcaaaacaaaac
gctgctgagcaaaatgcaaaccaaatcttttctgtttcagaagaagttactcgtcaacag
gccgaaagaccactggagagaaatattcaactggaatcccgaggattggcttcacggggt
gacttgaacatccctggtctcagtgaacaatgtatattagtggaccatcgagaaaggaat
acggactgcctgggtttacaggtgggcaagagagtgtgttccttcaagtcagagaaggtg
gtggtggaggacactgttcccataataccaaaggagaagcatgcaaaggaagaggactct
agtatagactatgatgtgaacctcacagacacagtcacccatgaagattatgtgaccaca
agactgtga
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