KEGG   Cyclopterus lumpus (lumpfish): 117725206
Entry
117725206         CDS       T09199                                 
Symbol
colec11
Name
(RefSeq) collectin-11
  KO
K10066  collectin sub-family member 11
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117725206 (colec11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117725206 (colec11)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:clum04091]
    117725206 (colec11)
Membrane trafficking [BR:clum04131]
 Endocytosis
  Phagocytosis
   Opsonins
    117725206 (colec11)
Lectins [BR:clum04091]
 C-Type lectins
  Collectins
   117725206 (colec11)
SSDB
Motif
Pfam: Lectin_C Collagen
Other DBs
NCBI-GeneID: 117725206
NCBI-ProteinID: XP_034381121
Ensembl: ENSCLMG00005019691
UniProt: A0A8C3AH03
LinkDB
Position
22:complement(12823654..12825376)
AA seq 267 aa
MIGEKLLLPIIIMSVLSFSYGQHMTEESCTVQILVPGLKGEPGEKGQKGAPGRPGRVGPP
GEIGQTGIKGQKGIMGRYGKVGPSGMKGVKGDMGDPGPKGLNGEPGVPCECTPMRKMIGE
MDIFVAQLSSELKFIKNAVAGIKETDSKVYLLVKEEKRYSDAEVYCQTRGGHLAMPKDEG
SNAAIAGYITEAGLNRVYIGINDLHREGVFTYVDLSVMTTFSRWRKGEPNNAYEEEDCAE
MVASGEWTDVACHPTMYFVCEFDKESA
NT seq 804 nt   +upstreamnt  +downstreamnt
atgataggagagaagctgttattgcccatcataataatgtctgtgctgagtttttcatat
ggacagcacatgacagaggagtcctgcactgttcagatccttgtccctggcctcaaagga
gaaccaggggaaaaaggtcaaaaaggagccccggggagaccaggaagagttggccctccc
ggagagattggtcaaactggaattaaaggtcagaaaggcataatgggacgatatggaaaa
gtgggcccaagtggaatgaaaggggtaaagggagacatgggggatccaggtccaaagggc
ctcaatggagaaccaggtgttccgtgtgaatgcactccaatgagaaaaatgattggagaa
atggatatttttgtggcacagctctcctctgaactgaaattcatcaaaaatgctgttgct
ggcataaaagagacagacagtaaggtctatctgttggtgaaggaggagaaacgctactcc
gacgcggaggtctattgtcagacgaggggagggcacctggccatgcccaaagatgagggc
tccaacgcggccatcgcaggttacataaccgaagcaggcctgaacagagtctacattggc
attaacgacctgcaccgcgagggtgttttcacctacgtggatctctctgtcatgaccact
ttcagcagatggagaaagggagagcccaacaatgcctatgaggaggaggactgtgctgag
atggtggcctctggggagtggactgatgtggcatgccacccgaccatgtattttgtttgt
gaatttgacaaggagagtgcctga

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