Cyclopterus lumpus (lumpfish): 117728285
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Entry
117728285 CDS
T09199
Symbol
slc8a2b
Name
(RefSeq) sodium/calcium exchanger 2b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117728285 (slc8a2b)
04020 Calcium signaling pathway
117728285 (slc8a2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117728285 (slc8a2b)
04261 Adrenergic signaling in cardiomyocytes
117728285 (slc8a2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117728285 (slc8a2b)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117728285 (slc8a2b)
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
117728285 (slc8a2b)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Others
117728285 (slc8a2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
117728285
NCBI-ProteinID:
XP_034385001
Ensembl:
ENSCLMG00005003155
LinkDB
All DBs
Position
25:complement(2089150..2114609)
Genome browser
AA seq
980 aa
AA seq
DB search
MSLSASPAPGLLLLPLLLFLLPLPPCQTESQRGDLSSGPSIDPEYRAVSPSMFPSSFPAS
ASYSNSTRPGKNDKCDEVSVCRPGILLPVWRPNRPGLGDQVARAVVYFASLMYMFLGVSI
IADRFMASIEVITSQEKEVTITLPNGETSVATVRIWNETVSNLTLMALGSSAPEILLSVI
EVCGHDFKAGELGPATIVGSAAFNMFVIIGICVWTIPAGETRKIKHLRVFFITAFWSIFA
YIWLFLILSVMSPGVVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMGKRYRADKRHGI
VVETEGDLTPNKGGMEMIVDGKFPPRGGAVMPAENCGVGTQDGMSNNVGLPNSNSAMVNM
ESSKELDESRKEVIRILKELKQKYPDKELDQLVELANYYALLHQQKSRAFYRIQATRMMI
GAGNVLKRHAADNARRTAATDEEAPEEEDLGESSRISFESAHSQCMENCGTLTLAVVCHG
GLGENTFYVDYRTEDGSANAGSDYEYREGTLVFKPGETRREIKVGIIDDDIFEEDEHFFV
RLLNLRVGDAEGMFESDEAGAAPKGRLMEPLVATVTILDDDHAGIFTFSERMVRVSESVG
TMEVTVVRNSGARGTVILPYHSESGTAKSGEDFEDARGELEFTNDQTTQTFQVRIIDDGE
YEKHENFFIVLEEPRWLKRGISALLLNQEGAEGQMSSEEEEARRIAEMGKPILGEHSRLE
VVIEESYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDEEEEGREERLPSC
YDYVMHFVTVFWKVLFACVPPTEYWNGWACFLVSISVIGLLTAFIGDLASHFGCTVGLRD
TVTAVVFVALGTSIPDTFASKVSAMQDQHADASIGNVTGSNAVNVFLGIGVAWSVAAIYW
RIKGEEFRVDPGSLAFSVTLFTVFAFVCMGVLMYRRRPSIGGELGGPRRARLVTSLLFLG
LWFLYILFSSLEAYCHISGF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcggcctcccccgcccccggcctcctcctcctccccctcctcctcttcctc
ctcccgctgcctccctgccagacggagtcccagcgcggcgacctcagcagcggcccaagc
atcgaccccgagtaccgagcggtctcgccctccatgttcccctcctccttcccggcttcc
gcgtcatacagcaacagcacccggcctggcaaaaacgacaagtgcgacgaagtgtcggtg
tgcaggcccggcatcctgctgcccgtctggcggccaaaccggcccgggctcggagaccag
gtggccagagccgtggtctactttgcgtcgctcatgtacatgttcctgggagtgtccatc
atcgcagaccgcttcatggcgtccatagaggtcatcacgtcccaggagaaagaggtgacc
atcactctgccgaacggggagacgtcggtggcgacggttcgaatctggaacgaaacggtg
tccaatctgacactcatggctctcggctccagcgctccggagatactgctgtctgttata
gaggtgtgcggccacgacttcaaggccggcgagctgggcccggcgaccatcgtcggcagc
gccgccttcaacatgttcgtgatcatcgggatctgcgtgtggacgatccccgccggagag
acccgcaagatcaagcacctccgggtgttcttcatcaccgccttctggagcatcttcgcc
tacatctggctcttcctcatcctgtccgtcatgtcgccgggtgttgtggaggtgtgggag
gccctggtcaccctgctgtacttccctgtgtgtgtcatcctggcctggatcgccgaccgc
cgcctcctcttttacaagtacatgggcaaacgctaccgggccgacaagcgccacggcatc
gtcgtggagaccgagggagacctgacgcccaacaagggcggcatggagatgatcgtagac
ggcaagttcccgccgcgggggggcgccgtgatgcctgccgagaactgcggggtcgggacc
caggacggcatgtccaataacgtcggcctgcccaactccaacagcgccatggttaacatg
gagagcagcaaggagctggacgagagccgcaaagaggtgattcgtatcctgaaggagctg
aagcagaaatatccggacaaagagctggaccagctggtggagctggccaactactacgct
ctgctgcaccaacagaagagcagggccttctaccgcatacaggcgacccgcatgatgatc
ggagccggtaacgtcctgaagaggcacgcggccgacaacgcgcggcgcacggcggcgacc
gacgaggaggcgccggaagaagaagacctgggagagagcagccgcatctccttcgagagc
gcccacagccagtgcatggagaactgcggcacgctgacgctggccgtggtctgccacggg
ggtctgggagagaacaccttctacgtggactacaggacggaggacggctcagccaacgcc
ggctcggactacgagtaccgcgaaggaacgctggtgttcaagcccggagagacccgcagg
gagattaaggtcggtataatcgacgacgacatattcgaagaggacgagcacttcttcgtg
cgcctgctgaacctgcgcgtgggcgacgcggaggggatgttcgagagcgacgaggcgggc
gccgcccccaaaggtcgcctgatggagcctctggtcgccacggtgaccatcttggacgac
gaccacgccggcatcttcacgttcagtgagcgcatggtgcgggtgagcgagagcgtgggc
accatggaggtgacggtggtgcgcaactccggcgcccgcggcaccgtcatcctgccgtac
cacagcgagtcgggcaccgccaagtctggcgaggacttcgaggacgcccggggagagctg
gagttcaccaacgaccagaccactcagacattccaggtgaggataattgatgacggtgaa
tacgagaaacatgaaaacttcttcatcgtgctggaggagccacgctggctgaagagagga
atctcagcgctgctgctcaaccaagagggggcagagggccagatgagctccgaggaggag
gaggcccggaggatagctgagatggggaagcccatcctgggagagcacagccgcctggag
gtggtcatcgaggagtcctatgagttcaagagcaccgtggacaagctcattaagaagacc
aacctggccctggtgatcggcacacactcctggagggagcagtttgtggaggcggtcact
gtcagcgcaggtgacggagacgaggaggaggagggccgcgaggagcgccttccgtcctgc
tacgactacgtcatgcatttcgtcaccgtcttctggaaggtcctgttcgcctgcgtcccg
cccacggagtactggaacggctgggcctgcttcctggtctccatcagcgtcatcggcctc
ctcaccgccttcatcggcgacttggcgtcgcacttcggctgcaccgtcggcctccgggac
accgtgaccgccgtggtgtttgtggcactgggaacctccattccagacaccttcgccagc
aaagtgtccgccatgcaggaccagcacgccgacgcgtccatcggcaacgtcaccggcagc
aacgccgtcaacgtgttcctgggcatcggcgtggcgtggtcggtggccgccatctactgg
cggatcaagggggaggagttcagggtggacccgggctcgctggccttctctgtcacgctc
ttcaccgtattcgctttcgtctgcatgggcgtgctgatgtaccgacgccggccctccatc
ggcggcgagctcggcggcccgaggagggcccgcctggtcaccagcctgctgttcctgggc
ctgtggttcctctacatcctcttctccagcctggaggcctactgccacatcagcggcttt
taa
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