KEGG   Cyclopterus lumpus (lumpfish): 117729766
Entry
117729766         CDS       T09199                                 
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
  KO
K14539  large subunit GTPase 1 [EC:3.6.1.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117729766 (lsg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:clum03009]
    117729766 (lsg1)
Ribosome biogenesis [BR:clum03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    117729766 (lsg1)
SSDB
Motif
Pfam: MMR_HSR1 RsgA_GTPase FeoB_N AIG1
Other DBs
NCBI-GeneID: 117729766
NCBI-ProteinID: XP_034387013
Ensembl: ENSCLMG00005016849
LinkDB
Position
4:complement(16854156..16859631)
AA seq 643 aa
MSKKKAGGLGRSLIKERLHAGRGNKRGDTWRHTCELNDGYDWGRLNLQSVTEQSSMDDFL
ATAEMAGTEFVAEKLNIKFVAAEARAGILTAEERNRLKKLHEDNKHFLRIPRRPHWDEAT
SSDVLKQTEKDSFLEWRRALAQLEEEQKLILTPFERNLEFWRQLWRVIERSDVVVQIVDG
RNPLLFRCADLELYVNEVSEHKVNMVLVNKADLLTKEQRRAWARHFQKQGLRAVFWSALA
ESERLDAEEKGMEVEEPECVKSDPEEEEEEGQPDNDILIQNGAAGDEEMKAAEQDDDDDK
ESGTDEEQQKKITVNEEDWHASSEDEEEEEGGAGSSNKSSFHNSSRLLHKDELLEVFKAF
HNGPRCKEGQLTVGMVGYPNVGKSSTINTILRNKKVSVSATPGHTKHFQTLYVEPGLCLC
DCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAVSHICQVIPRHVLEGTYGFNIIRPRE
DEDPDRPPSSEEMLMAYGYMRGFMTSHGQPDQSRSARYILKDFVCGKLLYCHPPPHINAQ
DFQPQHNNFLKIDSDFCDLSSTTPSKQRKIRRIENVVDKNFFHQENVRALSKGVQTVMGY
KPGSGPVGPAQPGTEVGGKPWKKHGNSNKKEKVRRLNKHLDVW
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgagtaaaaagaaagcaggcggactgggtcgatctttgatcaaggagagactccatgca
ggccgaggaaacaagaggggcgacacctggcgccacacatgtgagctgaatgatggctac
gactggggacggctgaacctgcagtcagtgacggaacagagttccatggatgactttttg
gccactgccgaaatggcaggaacagagtttgttgcagagaaactcaacatcaagtttgtg
gcagcggaagccagagcaggcatattaacagctgaagagcgaaacaggctgaagaagctg
catgaagacaacaagcatttcctcagaattccaagacgcccccactgggacgaagccaca
agttcagatgtgctgaagcaaacagagaaagacagcttcttggagtggagacgagcgctt
gcacaactagaagaggaacagaagttaattctcaccccatttgagagaaacctggagttc
tggagacaactgtggagagtgatcgagaggagtgatgtcgtcgttcaaattgttgatggc
agaaatcctttgctgttcagatgtgctgacctggaattgtacgtaaatgaagtgtcggag
cataaggttaacatggtgctggtgaataaggccgacctgctgaccaaggagcagaggcga
gcgtgggccagacacttccagaaacaggggctgagggcagttttctggtctgcactggca
gagagcgaaaggctggatgcagaggagaagggcatggaagtagaggagccagagtgtgta
aagagtgacccagaagaagaagaagaagaaggacagccagacaatgacatcttgatccaa
aatggggcagctggagatgaggagatgaaggcagcggagcaggatgatgatgatgataaa
gagagtggtacagacgaagagcaacagaaaaagataactgtaaatgaagaggactggcat
gcctcctcagaagatgaagaagaagaagaagggggagctggttcatccaataaatcctcc
ttccacaactcaagccggctgctgcataaggatgagctgcttgaggtgtttaaggcgttt
cataacgggcccaggtgtaaagaaggacaactaacagtgggaatggtcgggtatcctaac
gtggggaagagttccacaatcaacactatcctaaggaacaagaaggtgtctgtttcagcc
actcctggacacacaaagcactttcagactctgtatgtggagccaggcctgtgcctctgt
gactgcccaggtctggtcatgccttcctttgtttctaccaaagctgagatgatctgctcc
gggatcctgcccattgaccagatgagagatcacgtacctgcagtctcccatatatgtcag
gtgatccctcgacatgtcttagaaggcacctatggcttcaacatcatcagaccacgagaa
gatgaagaccccgacaggcctccctcctctgaggagatgctgatggcttatggatacatg
agaggctttatgacatcgcatggccagcctgatcaatccagatcagcccgatacatcctg
aaggattttgtctgcggaaagcttctgtactgccatcctcctccacatatcaacgctcag
gacttccagccgcagcacaacaatttcctgaaaatagactcggacttctgtgacctatcc
tccacaacgccaagcaaacaacggaaaatcaggagaattgaaaatgtggttgacaaaaac
ttcttccatcaggagaatgtgcgggcactctccaagggcgttcagactgttatgggctac
aagccgggcagcggacctgtcggcccagcccaacctggaacagaggtgggggggaaaccc
tggaaaaaacacggcaactcgaacaagaaggagaaagtacgccgtctgaacaagcacctg
gacgtctggtga

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