Cyclopterus lumpus (lumpfish): 117729766
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Entry
117729766 CDS
T09199
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117729766 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117729766 (lsg1)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
GTPases
117729766 (lsg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
RsgA_GTPase
FeoB_N
AIG1
Motif
Other DBs
NCBI-GeneID:
117729766
NCBI-ProteinID:
XP_034387013
Ensembl:
ENSCLMG00005016849
LinkDB
All DBs
Position
4:complement(16854156..16859631)
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AA seq
643 aa
AA seq
DB search
MSKKKAGGLGRSLIKERLHAGRGNKRGDTWRHTCELNDGYDWGRLNLQSVTEQSSMDDFL
ATAEMAGTEFVAEKLNIKFVAAEARAGILTAEERNRLKKLHEDNKHFLRIPRRPHWDEAT
SSDVLKQTEKDSFLEWRRALAQLEEEQKLILTPFERNLEFWRQLWRVIERSDVVVQIVDG
RNPLLFRCADLELYVNEVSEHKVNMVLVNKADLLTKEQRRAWARHFQKQGLRAVFWSALA
ESERLDAEEKGMEVEEPECVKSDPEEEEEEGQPDNDILIQNGAAGDEEMKAAEQDDDDDK
ESGTDEEQQKKITVNEEDWHASSEDEEEEEGGAGSSNKSSFHNSSRLLHKDELLEVFKAF
HNGPRCKEGQLTVGMVGYPNVGKSSTINTILRNKKVSVSATPGHTKHFQTLYVEPGLCLC
DCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAVSHICQVIPRHVLEGTYGFNIIRPRE
DEDPDRPPSSEEMLMAYGYMRGFMTSHGQPDQSRSARYILKDFVCGKLLYCHPPPHINAQ
DFQPQHNNFLKIDSDFCDLSSTTPSKQRKIRRIENVVDKNFFHQENVRALSKGVQTVMGY
KPGSGPVGPAQPGTEVGGKPWKKHGNSNKKEKVRRLNKHLDVW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagaaagcaggcggactgggtcgatctttgatcaaggagagactccatgca
ggccgaggaaacaagaggggcgacacctggcgccacacatgtgagctgaatgatggctac
gactggggacggctgaacctgcagtcagtgacggaacagagttccatggatgactttttg
gccactgccgaaatggcaggaacagagtttgttgcagagaaactcaacatcaagtttgtg
gcagcggaagccagagcaggcatattaacagctgaagagcgaaacaggctgaagaagctg
catgaagacaacaagcatttcctcagaattccaagacgcccccactgggacgaagccaca
agttcagatgtgctgaagcaaacagagaaagacagcttcttggagtggagacgagcgctt
gcacaactagaagaggaacagaagttaattctcaccccatttgagagaaacctggagttc
tggagacaactgtggagagtgatcgagaggagtgatgtcgtcgttcaaattgttgatggc
agaaatcctttgctgttcagatgtgctgacctggaattgtacgtaaatgaagtgtcggag
cataaggttaacatggtgctggtgaataaggccgacctgctgaccaaggagcagaggcga
gcgtgggccagacacttccagaaacaggggctgagggcagttttctggtctgcactggca
gagagcgaaaggctggatgcagaggagaagggcatggaagtagaggagccagagtgtgta
aagagtgacccagaagaagaagaagaagaaggacagccagacaatgacatcttgatccaa
aatggggcagctggagatgaggagatgaaggcagcggagcaggatgatgatgatgataaa
gagagtggtacagacgaagagcaacagaaaaagataactgtaaatgaagaggactggcat
gcctcctcagaagatgaagaagaagaagaagggggagctggttcatccaataaatcctcc
ttccacaactcaagccggctgctgcataaggatgagctgcttgaggtgtttaaggcgttt
cataacgggcccaggtgtaaagaaggacaactaacagtgggaatggtcgggtatcctaac
gtggggaagagttccacaatcaacactatcctaaggaacaagaaggtgtctgtttcagcc
actcctggacacacaaagcactttcagactctgtatgtggagccaggcctgtgcctctgt
gactgcccaggtctggtcatgccttcctttgtttctaccaaagctgagatgatctgctcc
gggatcctgcccattgaccagatgagagatcacgtacctgcagtctcccatatatgtcag
gtgatccctcgacatgtcttagaaggcacctatggcttcaacatcatcagaccacgagaa
gatgaagaccccgacaggcctccctcctctgaggagatgctgatggcttatggatacatg
agaggctttatgacatcgcatggccagcctgatcaatccagatcagcccgatacatcctg
aaggattttgtctgcggaaagcttctgtactgccatcctcctccacatatcaacgctcag
gacttccagccgcagcacaacaatttcctgaaaatagactcggacttctgtgacctatcc
tccacaacgccaagcaaacaacggaaaatcaggagaattgaaaatgtggttgacaaaaac
ttcttccatcaggagaatgtgcgggcactctccaagggcgttcagactgttatgggctac
aagccgggcagcggacctgtcggcccagcccaacctggaacagaggtgggggggaaaccc
tggaaaaaacacggcaactcgaacaagaaggagaaagtacgccgtctgaacaagcacctg
gacgtctggtga
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