Cyclopterus lumpus (lumpfish): 117731154
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Entry
117731154 CDS
T09199
Name
(RefSeq) retinoic acid receptor gamma-A-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731154
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117731154
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117731154
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117731154
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribosomal_60s
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
117731154
NCBI-ProteinID:
XP_034389208
Ensembl:
ENSCLMG00005003930
UniProt:
A0A8C2WVE9
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Position
5:complement(12358680..12393018)
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AA seq
560 aa
AA seq
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MATNREHQVRHITGFPRAMYPFTFNSMRSHSPFDLLASSHLFGRFGTDLPKEMAALSWLQ
NKRLKLCLLGFERSMFDCMEALGLGPRARFDVSAQGSCMLGKATPYFSGLDPFAWAGTGS
IQSVETQSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQ
KNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPE
NYELSGELEELVNKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCI
IKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQ
MHNAGFGPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLL
EALKIYTRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKTEIPGPMPPLIREMLEN
PEAFEDSSDSGDSAAAAPPAIQAIKQEEKATDESAVEEEEEEEEDDYWDEEKERGADSDG
ELSGEAAAGVQKKGVTGTTQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagggagcaccaagtgcgtcacataaccggcttcccccgggctatgtac
ccgttcacctttaactccatgcgtagccactccccctttgacctgctggccagtagccac
cttttcggccgttttgggacagaccttcccaaagagatggctgcattgtcttggctgcag
aacaagcggctgaagctgtgtttgctgggatttgagaggagcatgttcgactgtatggag
gctctggggcttggcccgcgggcccgctttgatgtgtccgcgcaaggatcatgcatgctc
ggcaaggcaaccccttacttctccggcctagaccccttcgcctgggctggaactggcagc
attcagtcggtggagacccagagcaccagctcagaggagatggtccccagctctccttct
cctcctcctccaccccggatctacaagccgtgctttgtgtgccaggacaagtcatctggt
tatcactatggagtgagctcctgtgagggctgcaagggtttctttcggcgcagtatccaa
aagaacatggtttatacatgccacagagacaagaactgccagatcaacaaagtgactcgc
aaccgctgccaatactgtcggctgcagaagtgctttgaagttggcatgtccaaagaagcg
gtgcgtaacgacaggaacaaaaagaagaaggatgtaaaggaggaggtggttctgccagag
aactatgagttgagtggagaactagaggagctggttaacaaagtcagcaaagctcaccaa
gagacctttccatctctgtgccagttaggaaaatacaccacaaattcaagtgctgaccac
agagtacagctggacttgggcctgtgggataagttcagtgagctgtccactaagtgcatt
ataaagattgtggagtttgccaagcggctaccaggcttcactacgctcaccatcgctgac
cagatcaccctcctcaaatctgcatgcctggacatcctgatgctgaggatatgcactcgc
tacaccccagaacaggacacgatgaccttctcagatggcctgacgctcaacaggacccag
atgcataacgctggctttggcccactgacagaactggtgtttgcctttgctggccagctg
ctgcctttagagatggatgacacagaaacgggcctactcagtgccatctgcctcatctgc
ggagaccgtatggatctggaggagccacagaaagtagacaagcttcaggagccgctgcta
gaggctctgaagatctatacccgccgcagacgcccaaacaagcctcacatgtttccccgc
atgctgatgaaagtcacagacctccgaggaatcagcaccaaaggtgcagaaagagccatc
acactgaagacggagatcccaggccccatgcctccactgatcagggagatgctggagaac
ccagaggccttcgaggacagcagtgactcaggggacagcgccgcagccgctccccctgct
attcaagccatcaaacaagaggagaaggccacagatgagtcagccgttgaggaggaagag
gaggaagaagaggacgactactgggatgaggagaaagagcgaggggctgacagtgatggg
gagctgtcgggggaggcagcagcgggtgtgcaaaagaaaggtgtaactggtacaacgcag
tga
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