Cyclopterus lumpus (lumpfish): 117732194
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Entry
117732194 CDS
T09199
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117732194 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117732194 (nup160)
03036 Chromosome and associated proteins [BR:
clum03036
]
117732194 (nup160)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117732194 (nup160)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117732194 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
117732194
NCBI-ProteinID:
XP_034390838
Ensembl:
ENSCLMG00005021665
LinkDB
All DBs
Position
6:177242..239073
Genome browser
AA seq
1390 aa
AA seq
DB search
MAAVLERSFLEICGFERETMHRFRDVTVKLPGVSALPGGVKFPDSAGAFHYEESGTLLSV
TSNRFIHWCTSGDRVQLVEQSLDTNLLNNAVRLQLSHCIVLPGGVHVHETLNNVVILVST
NQSVHRLVLPHPSRMYRSELVTELHMQSIFTDVGKLSLQDPSHSVLIPSSVGQAGSPSTS
TAWLSQSGEAHYALASPAGGIMVVSLPPHDTQGSVSVVELKRSSMMQRLSGWMPSSIRGE
QSPADLALSLAVRELEEDSFIFALCQDHKLRMWSFREQACLLEADMLDYMPACRGLKRLS
GQGHRLRLSPSPSGLCLCVYLAVPQRGQFTVLQLVSTDSSRYSLDHVSSLFTTQETLVDF
ALTSTDIWAVWVDDSNTTVVKYIDFEHNTAGQWNQVFVQPPPEEEVHIGVDQDPRETYLE
VLFSPLHFTASAIVKALQIYRRGSERITDLSWDSLKKEVTVAVESELQSSVTEFEFSQED
YRQLQVEFWSKFYACCLQYQEVQSLPLGLTVSQNTGLICLLKKGFVSFLLPCFAVDHLYL
SYDEYLFSEEETPITEEPELGRDVLQLVQCLRLVSDAVSGEMAYEMEKALEHLQSPERAA
DLVLENMLSNDNENVIEDIQNKLQDIRNPMGAMMVLLREMDLETDSDVGGEGTLVPGLNL
RISLSQLLGSSSAVSVVCQAVCHMTMTRTLFCRDLLILQKLYLRFGDNVFLGGGAQLLQL
QQDLIPRSSNLLSSYYLLKHISQSLASSVPIDIIDANLQHLTVLELSDTPALSTNRSVLS
PQTVVELFYQTAARKLIISQIYSQQQSNAPLRWSHMISNVVVLLAQLLWPSNPGFQFPEC
LMANCQYTQLQDYVRLIGPWCQVNIGSCRFMLGQCYLANGEGQKALQCFQEAATEVEKEE
FLLKLTGSEEEEAASTPRLQYYNKVLRLLEDVGLPELVIQLASLAITEAASDANSQAALW
TRIFKHHLDLGHNSEAYEALTQNPDCSMQLDCLRQLVVVLCERSQLQDLVQFSYVNLHDE
VVGIIESRARGLDLLAHNYYELLYAFHINRHNYRKAGTVMFEFGMRLGREVRTHLGLQKQ
VNCYLAALNCLRLIRPEYAWIVQPTSGAVYERPGASPKRNSDGEFSSDPVKHQVDILELK
DLEKEYILSRSRLTLAQHHPPSAAIAGSASAVEMVALLVQTGLFDSALSICQTFKLNLTS
VFEGLTFKCIKLQFRGEESQNEAWSWLAANQLSSVVNTKESSATDEAWQLLASYLDRYPS
ANGQHHRCVINKLLSHGVPLPDWLIKSYKEVDAASLLRLYLNFDLLDAAAELVLEYVDAL
LGRGHQYFGIESPLSATSSSVWLPYTSIDQLLQTLSETQTNSSIYIKVRDKLDDYHKLVE
QTTKRRLVSR
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttggagcgcagcttcctagagatctgcgggttcgagagagaaactatg
caccggttccgcgatgtgaccgtaaagcttcccggtgtgagtgctcttcctggaggagtg
aagttccctgacagtgctggagcgttccattatgaagagagtgggacgctgctgtccgtc
accagtaaccgattcatccactggtgtacttcaggtgaccgggtccagctggtggaacag
tctctggacaccaacctgctgaacaatgccgtcagactgcagctgtctcactgcattgtt
ctacctggaggggtccacgtccacgagaccctcaacaacgtcgtcatcctggtctccacc
aatcagagcgtccacagactggtgctgcctcacccctcacgcatgtaccgcagtgagctg
gtgacggagctccacatgcagtccatcttcactgatgtggggaagctgagtctgcaggac
ccgtctcacagtgtcctcatccccagctcagtgggacaggcggggagtcccagcacctcc
acagcctggctcagtcagtctggagaggctcactacgctctggcttcacctgctggaggg
atcatggtagtctctctgccacctcatgacacacaaggaagcgtgtcggtggtggagctg
aagaggagctccatgatgcagaggttgtcgggctggatgccctcatcgatccgcggggag
cagagtccggcggacctggccctcagtctggctgtcagagagctggaggaagactccttc
atcttcgctctctgtcaggaccacaagctgcgtatgtggtccttcagggagcaagcctgt
ctgctggaggccgacatgctggactacatgccggcctgcagaggcctgaagcgcttgtcc
ggtcagggtcaccgcctgaggctgtccccgtccccctccggtctctgtctgtgcgtctac
ctggccgtccctcagaggggacagttcaccgtcctgcagctggtctccaccgacagcagc
cgctacagcctggaccacgtgtcctctctgttcaccacgcaggagactctggtggatttc
gccctgacctccacagacatctgggccgtctgggtggacgactccaacaccactgtagta
aaatacattgactttgaacataacacagcaggtcagtggaaccaggtctttgttcaacct
ccgcctgaggaggaagtccatatcggtgtggaccaggaccccagagagacgtacctggag
gttctcttctctcctctacacttcacagcttcagccatagttaaagctctacagatctac
cgtagaggctcagagaggatcactgatctgtcctgggacagtctgaagaaagaggtgacg
gtggctgtggagagtgagctgcaaagcagtgtgacagagtttgagttctctcaggaggat
taccgtcagctgcaggtggagttctggtccaagttttacgcctgctgtcttcagtaccag
gaggtccagtctctccctctgggtctgactgtgagccagaacacagggctcatctgtctg
ctaaagaagggtttcgtgtcgttcctcctgccgtgcttcgctgtggaccatctctacctg
tcttatgatgagtacttgttctcagaggaggagacacccatcactgaagaacctgagctg
ggccgggacgtgctgcaactggttcagtgtctgcggctggtcagtgatgcggtttctgga
gagatggcgtatgagatggagaaagccctggaacaccttcagtcacctgagagggcggcg
gatctggtcctggaaaacatgctgtccaatgacaatgagaacgtgatcgaggacatccag
aacaaactgcaggacattcggaacccaatgggcgccatgatggtcctcctgagggagatg
gacttggagacggactcggacgtggggggagaaggaactctcgtacctggtctgaacctg
aggattagcctgtctcagctgttgggcagcagctcagcagtttctgtggtctgccaggcc
gtctgtcacatgacaatgaccaggaccctgttctgtagagatctgctgatcctgcagaaa
ctctacctgcgcttcggagacaacgtgtttctgggggggggggctcagctgctgcagctc
cagcaggacctgatccctcgcagctccaacctcctttcctcttattacctcctcaaacac
atcagtcagagcctggcatcctctgtccccatcgatataatagacgctaacctgcagcac
ctcacagtgttggagttgtcggacacgccggccctctccaccaacagatcagtgttgagt
cctcaaacggtggtggagctcttctatcagactgcagccaggaagctgatcatctctcag
atttactctcagcagcagagtaacgctccgctccgctggagtcacatgatctccaacgtg
gtcgtcctgctcgcacagctgctttggcccagtaaccctggtttccagttcccagagtgt
ctgatggccaactgtcagtacacacagctgcaggactatgtgcgcctgatcgggccgtgg
tgtcaggtgaacatcggttcctgccgcttcatgctgggtcagtgttacctggccaacggg
gagggccagaaggctctgcagtgtttccaggaggcagcgactgaggtggagaaggaggag
ttcctgctgaaactgacgggcagcgaggaggaggaggctgcctccacccccagattacag
tactacaacaaggtgctgcggctgttggaggatgtgggtctacctgagctggtcatccag
ttggcctctctggccatcacggaggccgccagcgacgccaacagtcaggcggctctgtgg
actcgaatattcaaacaccacctggatctgggacacaacagtgaagcttacgaagcgctc
acccagaacccagactgcagcatgcagctggattgtctccgtcagctggtcgtggttctc
tgtgagcgttctcaactccaagatttagtccagttctcctatgtcaacctgcacgatgag
gtggtcggtattatcgaatctcgggccagaggtttggacctgctggctcataattactac
gagctgctgtacgccttccacatcaacagacacaactacagaaaagcggggacggtcatg
tttgagtttgggatgcgtctcggtcgggaggttcggacacatctcggccttcagaagcaa
gtgaactgttacctggctgctctcaactgtctccgcctcatcagaccagagtacgcctgg
atcgtccagccgacctccggagctgtgtatgagcgtccaggagcgtctccaaagaggaac
tctgatggagagttttcttctgatccagtcaaacatcaggtcgacattctggaactcaag
gacttggagaaagagtacatactgtcccgcagccgcctcaccctcgcccagcaccacccg
ccgtctgctgccattgctggaagtgcctcagcagtggagatggtggccctgttggtccaa
acaggactgtttgactcggctttgtccatctgtcaaaccttcaaactgaacctgacttca
gtatttgagggtctgaccttcaagtgcattaaacttcagtttaggggggaggagtctcag
aacgaagcctggagctggttggctgctaatcagctgtcgtctgtcgtcaacaccaaagag
tccagcgctacagatgaggcgtggcaactgctggcctcttacctggacaggtatccctcc
gctaatggacaacaccaccgctgtgtcatcaacaaattgctgtcacacggcgtccctctg
cctgattggctgatcaagtcctacaaggaagtagacgctgcctctctgctgcgtctctac
ctgaactttgacctcctggacgctgcagctgagctggtgttggagtacgtggacgctctg
ctcgggagaggacaccagtactttggaatagagagtccgctgtcggcgacgtcgtcctcc
gtctggctgccgtacacgtccatcgatcagctgctgcagactctgagcgagacgcagact
aacagcagcatctatattaaagttcgagacaaattggacgattatcacaaactggtggag
cagacgaccaaacggagactggtctctcgatga
DBGET
integrated database retrieval system
