KEGG   Cyclopterus lumpus (lumpfish): 117733571
Entry
117733571         CDS       T09199                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial-like isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum00260  Glycine, serine and threonine metabolism
clum00630  Glyoxylate and dicarboxylate metabolism
clum00670  One carbon pool by folate
clum01100  Metabolic pathways
clum01200  Carbon metabolism
clum01230  Biosynthesis of amino acids
clum01240  Biosynthesis of cofactors
clum04981  Folate transport and metabolism
Module
clum_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:clum00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    117733571
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    117733571
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    117733571
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    117733571
Enzymes [BR:clum01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     117733571
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 117733571
NCBI-ProteinID: XP_034393225
Ensembl: ENSCLMG00005001372
LinkDB
Position
7:complement(9067266..9075606)
AA seq 547 aa
MIYCCRDFCSSTKYKCPWLSSSTDYTFTLCTPKSFLFSQHSPVTGMLSLSLQQTIRPLLL
RASGCLGREGQVTAASCRRGLSSAARWTGQENLAQDDPEMWSLLQQEKDRQCRGLELIAS
ENFCSRAALEAQGSCLNNKYSEGYPGQRYYGGAEIVDKIELLCQKRALFAFGLDPNLWGI
NVQPYSGSPANFAAYTSVLQPHDRIMGLDLPDGGHLTHGYMTDTKRISATSIYFESMPYK
LDPKTGLIDYNELEKTARLFRPKLIIAGTSAYARLIDYSRMKKLCVELNAYLLADMAHIS
GLVAAGAVPSPFQHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKKGREVTYDLQDRVNF
AVFPSLQGGPHNHAIAGVAVALKQASTPMFKQYIAQVLLNAKSMANALLKKGYTLVSGGT
DNHLALVDLRPNGMDGARAERVLELVYITANKNTCPGDKSALSPGGLRLGTPALTSRQFK
EADFEKVVEFIDEGIQIALDVKKKTENLSSFKSFLLEDQETVSRIAGLRQRVELFARPFP
MPGFTDH
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgatttactgttgcagagacttttgcagtagcacaaagtacaaatgtccttggctttcc
tccagtactgattatactttcaccctttgcaccccgaaaagctttctgttttcccagcac
tcacctgtcacaggcatgctttctctgtcgttacagcaaacaatacggcccctcctcctc
agggcttcaggatgtctgggccgagaggggcaggtcacagcggcgtcatgcaggcgaggt
ctcagcagcgcagccaggtggacggggcaggagaacctggctcaggacgacccggagatg
tggagcctcctgcagcaggagaaggacaggcagtgtcggggactggagctcatagcatca
gagaacttctgcagccgtgcagcgctcgaggctcagggctcctgtctgaacaacaaatac
tctgagggatacccaggacaaaggtactatggaggtgcagagatagttgacaagattgag
ctgctgtgccagaagagagcactcttcgcattcggtctggacccaaatctgtggggcatc
aacgtccaaccatactctggatcccccgctaactttgcagcctacacatctgtactgcag
ccccatgaccgcatcatgggcctggatctgccagacgggggacaccttacccacggctac
atgacagacaccaagagaatctcagccacctccatctactttgaatcgatgccttacaag
ctggatcccaaaacaggtctgatagattataacgagctggagaagacggcccgacttttc
agacccaaactcattatagcaggaaccagcgcctacgctcgcctcatcgactactctcgc
atgaagaagctgtgtgtggagcttaatgcctacctgctggcagacatggctcatatcagc
ggcctggtggcagcaggagctgttccctctcctttccagcacgctgacctggtcacctcc
actacccataagtccttgcgtggagcaagggctggtctgatcttctaccggaaaggtgtg
cggtctgtggataagaaaggtcgggaggtgacctacgacctccaggacagggtgaacttt
gccgtgttcccgtcacttcaaggaggaccacacaaccacgccattgcaggggtggccgtc
gccctcaaacaggcttctactcccatgttcaaacagtacattgctcaagtgctgctgaat
gccaagtccatggctaacgctctgctgaagaaaggctatacgctggtgtcaggtggaaca
gacaaccacctggccttggttgaccttcgacccaacggaatggatggggctcgagctgag
agggtcctggagctggtatacatcaccgccaacaagaacacctgccctggagacaagagc
gctctctctccaggaggactcagactcggaactccggctctaacctccagacagttcaag
gaggcggactttgaaaaggttgtggagtttattgatgaagggattcagatcgcactggat
gtgaaaaagaagactgaaaatctgtccagcttcaagtccttcctgctggaggaccaagag
acggtgtcgcgcatcgcggggctccgccagcgggtggagctatttgcaagacccttcccc
atgcccggattcactgaccactaa

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