Cyclopterus lumpus (lumpfish): 117733977
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Entry
117733977 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117733977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733977
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117733977
GBAF(ncBAF) complex
117733977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117733977
NCBI-ProteinID:
XP_034393873
LinkDB
All DBs
Position
7:21483842..21491281
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AA seq
396 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQAIQKMLDENHHLIQCIMDHQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMPVGPGGMGLSNLNDNMGPGLPPSAMMQSQMSNGPSHA
PMQQHAGQVQSASPSASLGLQAGSYGSPASASGYGHAAPSSQGTGPGYGSSSSSSSSSRS
NLNMQSNQVSMMHQQSATAHYSSAQVGSQHYQGQQAMGMMGQGSQGHSMMSQRPVGSYRS
AQQGSVQDLQSDEFYHEQYGLTQSSSEPINRQYYSAGHGEYSYQQSSYGEQGYDRSFDES
SQHYYEGGNSQYSQQQAQYQQGSGQPFSQQQYSSQQGYGGQAQGYGPGQGGSSQYSQYQQ
GQSQQYGSYRSSQAGSGAPTQRPYAYEQGQYGNYQQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttttcatcggcgcgccccaggagtaaaggggaggtgacacagcaagcg
attcaaaagatgctggatgagaatcatcacttaatacaatgtataatggatcaccaaagc
aaaggcaagacggctgaatgcacacagtatcagcagatcctgcacagaaatcttgtgtac
ttggccacgatagcagattcgaatcagaacatgcagtcactactacccgcacctcccact
cccaacatgccggtgggtcctggagggatgggcctgagcaacctcaatgacaacatggga
cctggactgcccccctcggcaatgatgcagagccaaatgagcaatggccccagccacgcc
cccatgcagcagcatgctggtcaggtgcagtcggctagtccctccgcatccctcggcctg
caggccggcagctacggtagcccggcctcagcctccggctacggccacgctgcgccttcc
tctcagggcaccgggcctggctacggctcttcctcctcctcctcttcctcctcccgcagc
aacctcaacatgcaatccaaccaagtatccatgatgcaccaacagtctgcaactgcacac
tactcctcagcccaggttgggagtcaacactatcagggacagcaggccatgggcatgatg
ggtcagggcagtcaaggacacagtatgatgtctcagaggcccgtgggaagctaccgctcc
gcacagcaaggtagtgtgcaggatctgcagagcgatgagttctaccatgagcagtatgga
ctcactcagagctccagcgagcccataaaccggcaatattactccgcaggtcacggggag
tactcgtaccaacagtcttcatacggggagcaaggctacgaccggtcctttgatgaatcc
tcacagcattactacgaaggaggtaactcccagtacagtcagcagcaggcccagtatcag
cagggatctggccagcccttcagccagcagcagtactcctctcaacaaggctacggaggg
caggcacagggatacggtcctggtcagggtggatcctctcagtattctcagtatcagcag
ggtcaaagccaacagtatgggtcctaccgctcctcccaggccggctctggagcgccgacg
cagaggccctacgcctacgaacagggtcagtatggaaattatcagcaataa
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