Cyclopterus lumpus (lumpfish): 117733980
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Entry
117733980 CDS
T09199
Symbol
spo11
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733980 (spo11)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
117733980 (spo11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
117733980
NCBI-ProteinID:
XP_034393877
Ensembl:
ENSCLMG00005017339
LinkDB
All DBs
Position
7:21599577..21605108
Genome browser
AA seq
390 aa
AA seq
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MASRVSELFSEVDKLRTELLNNVELMTDCLRVEEEVSSRDILTRIENVILGIVTSLSRDE
APVLALPNRSSWANISFDSAVGLQMNPGCSVTTVRSDCPSSVTKFAQILKIFLVIYKLVQ
SNSFATKRDIYYNNTQLFGSQKAVDSIVDDISCMLKVTRRSLHVLATSKGLISGALCYLE
EDGTRIDCRSSSAAVAVSSNIRGIRNIVSAAKFVMIVEKDATFQRLLDDDFCTKMSPCII
ITGKGVPDVNSRLMVRKLWDALHVPVFALVDADPHGIEIMCIYKYGSVSMSFEARSLTVP
SVMWLGLLPTDLKRLRVPEDSLIPLTRRDESKLCSLLKRPYVTGKPDWQREMELMQQSKV
KAEIQSLAAIAPDFLTSIYLPNKLRYGGWV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgtgtatcagagctgttttcagaagttgataagcttcgtactgaactgctg
aacaatgtcgaactgatgacagattgcctgcgtgttgaagaagaagtcagcagcagggac
attttgacccgcattgaaaacgtaatcctcggaatagtgacgagtctttccagagacgag
gcccccgtcctggcactgcccaacagatccagctgggccaacatcagcttcgacagtgcc
gtcgggcttcaaatgaacccgggatgctccgtcaccaccgttcggagcgactgtccgtcg
tccgtcactaaatttgcgcaaattctcaagatcttcctggtcatctacaaacttgtgcag
agcaactcgtttgcaacgaaaagagacatctattacaacaacacacagctgtttggctct
cagaaggctgttgatagcatcgtggatgatatttcctgcatgctaaaggttacacgcaga
tcactacatgtgttggccacgtcaaagggattaatatcaggtgccctgtgttatttggag
gaggacggcacaaggattgactgccgctccagctcggctgccgttgcagtttcatcaaac
attcgtgggattagaaatattgtgtcggctgctaaatttgtcatgatagttgagaaggac
gcgacgtttcagagactactggacgacgacttctgcaccaagatgtccccttgcatcatc
atcacaggtaaaggcgtgccagacgtgaacagcaggctgatggtgagaaagctttgggac
gcgctgcacgtccccgtcttcgctctggtggacgccgaccctcacgggattgagatcatg
tgcatctacaagtacggatcagtgtccatgtcgtttgaggcccgcagtctgactgtcccc
agcgttatgtggctcggcctcctccccactgacctcaagaggctgcgggttcccgaggat
tccctgatccccctcaccaggagagacgagagcaaactctgcagcctcctcaaaaggccg
tacgtcaccggcaaacccgactggcagagagagatggagctgatgcagcagagcaaagtc
aaggctgaaatacagtccctcgcagccatagcgccagatttcctcaccagcatctacctg
cccaacaagctgcggtacgggggctgggtatga
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