Cyclopterus lumpus (lumpfish): 117734606
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Entry
117734606 CDS
T09199
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117734606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117734606
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Others
GGA
117734606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
GGA_N-GAT
Alpha_adaptinC2
ImmE5
Cytochrom_C_2
Hrs_helical
ZapD
PCRF
DUF2959
Ferritin
Motif
Other DBs
NCBI-GeneID:
117734606
NCBI-ProteinID:
XP_034394680
Ensembl:
ENSCLMG00005021002
LinkDB
All DBs
Position
8:14379293..14387325
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AA seq
741 aa
AA seq
DB search
MRRSSASPRPLRARESLARPTHRINLAVMAAPPDTESLESRINIATNPLNRDTDWSSIHG
FCDQLNNDLEGPQLATRLLAHKIQSPQEWEAMQALLVLETCMKNCGKRFHSEVGKFRFLN
ELIKVVSPKYLGSRSPEPVKKKVLELIFSWTLGLPDEAKISDAYQMLKKQGIIKQDPELP
PDQLLNLPPPRPKNAIFEDEEKSKMLSRLLNSSHPEDLKAANKLIKEMVQEDQKRAEKVS
KRVNAIQEVKESVALLTQLLQDYDDTADNQSNAELLQDLYQRCEKMRPTLFRLASDTEDN
DEALAEILQANDSLTQVINQYKQQVKGEIVNNTLNTQRITGGTALLDLSGLDTSPHSPPS
FPEFPTPTDSLNAPSQEMGISLLDDELMSLGLSEGTHTSNPLSQPEDSTAWDSFQVYYHY
SSGKQTQLIIIHLANTQNFIIHYHIHASLLSIQLQYNQDIHTTICPHTFYFQSSDSIDAD
IPAAPSLLLSPDPASHSQPLSSGSTPGNSALDELDLLGKTLMQQSLPPEDMQVKWDKQQC
KPTLRDLQSKSGCNITPNPIPTFAAEHPAPLLNSQPSLAASLLDMSPTHTETPPVDVTLT
DVFVPLESIKPSSLLPVTVFDGHSLRVLFHFARDSPPSRTDVLVVIISMLSSAPIPVDNI
NFQTTAPKSMAVKLQPPSGTELPAFNPIHPPAAVTQILLLANPNKEKVQLQYSLTFTMGQ
QEHSESGSLEQFPPPEMWGNL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcagctctgcgtctcctcggccgctacgtgcccgtgagtccctcgcgagaccg
acgcatcgcataaatctcgcagtgatggctgcgccgcccgacacggagagtttggagtct
cgtatcaacatagccacaaacccactgaaccgagacacagactggagcagcatccacggc
ttctgtgaccagctcaacaatgacctggaggggcctcagctggccaccaggctcctggcc
cacaagatccaatctccacaggagtgggaggccatgcaggccttgctggttctggagacg
tgtatgaaaaactgcgggaaaaggtttcacagtgaagttggcaagtttcgttttctcaat
gaactcatcaaagtagtttctccaaagtacctgggctcccggtcaccagagccagtcaaa
aagaaggttttggagttgatctttagctggactttggggttacctgatgaggccaagatc
tcagatgcttatcagatgctgaagaaacaaggtattattaaacaagacccagagctgcca
cctgaccaactgctgaaccttcctccacccagacccaagaatgccatttttgaggacgag
gagaagtcaaaaatgttgtctcggctgttgaacagctctcaccccgaggacctaaaagct
gccaacaaactcatcaaggaaatggtgcaagaggatcagaagcgagcagagaaggtgtca
aagcgggtgaacgccattcaggaggtgaaggagagcgtcgctctgctgactcagcttctg
caggactacgacgacaccgctgacaatcagagcaacgctgaacttctgcaggatctgtac
cagcgctgtgagaaaatgagacctacactgttcagactggcaagtgatacggaggacaac
gacgaggctctggccgagatcctgcaggcgaacgacagcctgactcaggtcatcaaccag
tacaaacagcaggtgaagggggagatagtgaacaacacattgaacacacagaggataaca
ggagggacggcactgctcgatctgtcaggattggacacatcgccacactcacctccgtcc
ttcccagagttccccactccaacagacagcctcaatgccccttcgcaagagatggggatc
agtctgctggacgacgagctcatgtcactcggtttaagtgaaggaacacacacctccaac
cctctctcgcagcctgaggactccaccgcctgggactccttccaggtttattatcattat
tcatctggcaaacaaactcaacttattattattcatctggcaaacacgcaaaacttcatt
attcattatcacattcatgcatcattgctttcaatacagctccagtataatcaagacatc
cataccactatttgtcctcatactttctacttccagtcctccgacagcatcgacgcagac
atcccggcagcacccagtcttctcctgagtccagaccccgcctcccactctcagcccctc
tcgtctggctctacacctgggaactctgctctggatgagctggacctgctgggaaagacc
ctgatgcagcagtccctgcctccagaggacatgcaggtcaaatgggacaagcagcagtgc
aaaccaactctgagggatctgcagagcaagtctgggtgcaacatcaccccaaaccccata
ccaaccttcgccgctgaacatcccgcgcctcttctcaactctcagcccagccttgcagcg
tcgttgctggatatgtccccgacacacacagagacgccacctgtcgatgtcaccctgact
gatgtttttgtaccgctagaatccattaagcccagtagtctgttacctgtgacggtgttt
gatggacacagcctgcgggttctctttcactttgctcgggactcgcctccctctcgtacc
gatgtgctagtggtgataatctccatgttgtcatctgctcccatacccgtcgacaacatc
aacttccagaccacagccccgaagtctatggcagtgaaacttcagcccccatcaggaaca
gagctcccagctttcaaccccatccatcccccggctgcggtcacacagatcctgctgctg
gcgaacccaaacaaggagaaagtgcagctgcagtacagcttaaccttcaccatgggacaa
caggagcacagcgagagcggaagtctagaacagttccctcctccagagatgtgggggaac
ctatag
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