Cyclopterus lumpus (lumpfish): 117735464
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Entry
117735464 CDS
T09199
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117735464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117735464
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Others
GGA
117735464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
GGA_N-GAT
Alpha_adaptinC2
DASH_Dad4
VCIP135_N
LidA_Long_CC
DUF6675
Motif
Other DBs
NCBI-GeneID:
117735464
NCBI-ProteinID:
XP_034395990
Ensembl:
ENSCLMG00005000231
LinkDB
All DBs
Position
8:21781613..21787759
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AA seq
764 aa
AA seq
DB search
MAYQEGESLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQIAVTLLVHKIHSPQEW
EALQALTVLQACMKNCGRRFHNEVGKYRFLNELIKVVSPKYMGESAPEKVKMKIVEMLYS
WTVAFPNETKIGEAYQTLRRQGLVTHDPELPLDRTLIPSPPTRPKHPVFDNEDMGKLLAE
LLRSKNPEDLQEANRLIKNMVKEDEARVQKVTKRIHTLDEVNINVKLLTEMLSHYNKDRS
SNSDKDIIKELYERCDKLRRAAFKMATETEDNDTNLGDILQASDDLSRVINAYKKIVEGQ
PINGDSEEPRSTAGHSESETTDTLIDLAGLDTPSPPQPADPPFRSSSLVSTIPVLPPPPK
RLAGSHGSPSSSPSHPPLDKASTALSLLDDELLSLGLNDPPTSLSSQSKPKLNELSNQWT
SLQAPAAGVDLFGGAARSGPAVPPAEPAAATHSLQDLQDLAMMGFSDHKSLSIQMTARGS
GFGLPAAAPPLVPGHGSPSSPSFLQGTFPGSPALSHTKAQSLGSAPGSPLFRSLSPCHLP
LQGSPARAMDSLSNVHVPLEAIRPSKVLPVTAYDKDGVRMLLNFASDCPPGRPDVLVMVV
STLNTAPLLVHDVVLQAAVPKSMKVKLLPPSGTELAPFNPILPPASITQIMLLANPTRVG
GTITLKDTNTQRALMPSVCVCVHRRRCVCATSWLSNSATVCATRSARSTSSPHQRHGVSY
RGVQGQTGSCSMKVCVCVCTSVHPRKKGTWGNLAALHVTVSHSL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggaaggggagtcgcttgaatcctggctgaataaagccacccatccgacc
aacaggcaggaggactgggagtacatcataggcttctgtgatcagatcaacaaggagctg
gaaggtcctcagatagctgtgactctgctcgtccacaaaatacactctccacaggaatgg
gaagctcttcaggctctgacggtgttgcaggcatgtatgaagaactgcgggaggaggttc
cacaacgaagtcggaaaatacagatttttgaatgagctgattaaagttgtatctccgaag
tacatgggggagagtgcacccgagaaggtgaagatgaagattgtcgagatgctgtacagc
tggacggtggcttttcccaatgaaaccaagatcggcgaagcctaccagacgctgcgcaga
cagggcctcgtgacgcatgaccccgagctaccgctggacaggactctgatcccgtctcct
ccgactcgaccgaaacatccagtgtttgacaacgaggacatgggcaagctgcttgctgag
cttctccggagtaaaaatccagaggatctccaggaagccaacaggttgatcaaaaacatg
gtgaaagaggatgaggctcgagtgcagaaggttacgaagcgcatccacacgctggatgag
gtgaacatcaacgtcaagctgctgacggagatgctgtcccactacaataaagaccgctcc
tccaactcggacaaggatatcatcaaggaactctacgagcgatgtgacaagctgaggcgt
gcggctttcaaaatggccactgagacggaggacaatgacaccaatttaggtgacatcttg
caggccagcgatgacctctccagggtcatcaacgcctataagaagattgtcgaggggcag
cccatcaacggcgacagcgaggagcctcgatccacagctggtcacagtgagagtgagacc
acagacacactgatcgatctcgccggcctcgacactccaagcccccctcagcccgccgac
cctcccttccggtcctcgagtctcgtctccaccatccccgtcctgcctcctcctcccaaa
cgcctggccggctcccacggcagtccgagcagcagcccgagtcacccccccctggacaag
gcctccactgccctctcactcctcgatgacgagctgctgtctctaggactgaacgacccc
cctacctctctgagcagccaatcaaaacccaagttgaatgagttgtccaatcagtggact
tccttacaggctccagctgcaggtgtggatctgtttggcggtgcagctcgttcaggtcca
gctgtgcctccggctgaaccagctgctgccacacacagcctccaggacctgcaagacctg
gccatgatgggcttttcagatcacaagagtttgtccatccagatgacggccagaggaagc
ggctttgggcttcctgctgcagctcctcccctcgtgcctgggcatggatctccctcctct
ccttctttcctccagggaacgttccccggctctcctgctctgtcccacaccaaggcccag
agcctgggctccgccccgggcagcccgttgttccgctccctgtccccctgccacctcccc
ctccagggtagcccagccagagccatggactccctgagcaacgtgcacgtccctctggag
gccatccgaccgagtaaagtgctgcctgtgacggcctacgataaggacggcgttcgcatg
ctcctcaactttgcatccgactgtccccccggcaggcctgacgtgttggtaatggtggtg
tccacgctcaacacggcaccgctgctagttcacgacgtggtgctgcaagccgctgtgccc
aagtcaatgaaggtgaagctgctgcctccatcaggaacagaactggccccgtttaacccc
atcctgcctccagcctccatcacccagatcatgttgctggctaacccaacaagggtaggc
ggcacaataacacttaaggacacgaatacacagagagctttaatgccgagtgtgtgtgtg
tgtgttcacaggagaaggtgcgtctgcgctacaagctggctttcaaactcggcgaccgtc
tgtgcaacgaggtcggcgaggtcgaccagttccccccaccagagacatggggtcagctat
agaggagtgcagggacagaccggttcatgctccatgaaggtgtgtgtgtgtgtgtgcaca
tccgtccatcccagaaagaaaggcacgtggggaaatttagctgcactccacgttacagtt
tcacattccttatag
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