Cyclopterus lumpus (lumpfish): 117736526
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Entry
117736526 CDS
T09199
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03440
Homologous recombination
clum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117736526 (top3b)
03460 Fanconi anemia pathway
117736526 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117736526 (top3b)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117736526 (top3b)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117736526 (top3b)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Topoisomerases
117736526 (top3b)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117736526 (top3b)
FA (Fanconi anemia) pathway
117736526 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
117736526
NCBI-ProteinID:
XP_034397813
Ensembl:
ENSCLMG00005000241
LinkDB
All DBs
Position
9:25418418..25437663
Genome browser
AA seq
858 aa
AA seq
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MRTVLMVAEKPSLAQSIAKILSKGTCTSRKGLNGACSVHEYPGSFQGQSVRFKMTSVCGH
VMSLDFIGMYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGCDYVVLWLDCDK
EGENICFEVLDAVQPVMNQGGVRDQTVYRAKFSSITDTDIWNAMNCLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFRGKDSPLTLDWNRVRVFDRDVGQMFVNLTKTSREAQVESVSKKEKVKQRPQA
LNTVEMLRVGSSALGMGPQHTMQIAERLYIQGYISYPRTETTHYPENFDLKGTLKQQANN
PMWAEEVKALLSTGLNRPRKGADVGDHPPITPMRAASEAELGSDGWRLYDYITRHFIATV
SQDCKYLQTTIDFNIGKEAFSCSGKTLISAGYTVVMPWQGIPLEEAMPVCERGDTFTVDE
IKLVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNVCQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRSAVEKQLTLISLGKANFQQVLQHTLDIFKRKFHYFVDSI
PSMDELMEVSFSPIAASGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPLCPYCFSNTPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECDGGVLVLDPTSGPKWKMACNKCNVVVHFFEHAHRVQVAQESCDACDASLVA
VDFNKTRTPLPVGETQHTGCVFCDPVFQDLVELKHATMRHAMYRGGGARRGGRGRGRGRR
GNPKKPKDKMAALAAYFV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggttctgatggtggcagagaagccatccttggcgcagtccattgccaaaatc
ctgtccaaaggaacgtgtacaagtcgcaagggactcaacggagcgtgctcagtgcacgaa
taccccggcagcttccagggccagagtgttcgctttaagatgacttctgtttgtggacat
gtgatgagtctggatttcatcggcatgtacaacaactgggacaaggtggaccctgctgaa
ctctttagcaaggcccccacagaaaagaaggaggccaaccccaaactcaacatggtgaag
ttcctccaggttgaagccagaggctgtgactacgtggttctatggctggactgtgataaa
gaaggcgagaacatctgctttgaggtactggatgctgtccagcccgtgatgaaccagggg
ggcgtcagggaccaaacggtctaccgcgccaagttcagctccatcaccgacaccgacatc
tggaacgccatgaactgccttggagagcccaaccgcaatgaagccctgtccgtggatgca
cgccaggagctggacctgcgcatcggctgtgccttcacccggttccagaccaaatatttc
cagggtaagtacggcaatctagactcctccttaatctcatttggaccatgccagacccca
acactaggcttctgtgtggaacgccacgacaagatccagtcctttaaacccgagacgtac
tgggtcatccaggcaaaggtattcagaggaaaggacagcccactgacactggactggaac
agggtgagggtcttcgacagggatgtgggtcagatgtttgtcaacctgaccaagacatcc
agggaggcgcaggtggagtccgtgagtaagaaagagaaggtgaagcagaggccccaggcc
ttgaacactgtggagatgttgagagtgggcagctctgccttaggcatgggtccccagcat
accatgcagattgcagagcgcctgtatattcagggctacatcagctacccacggactgaa
acaacccactacccagagaactttgacctgaagggaacactgaagcagcaggccaacaat
cctatgtgggcagaggaggtgaaggctctgctttcaactggtttaaaccgacccaggaaa
ggagctgatgtcggagaccatccacctatcactcccatgcgtgctgcctcagaagcggaa
ctgggaagtgacggctggcggctatatgactacatcacacgccatttcattgccaccgtc
agtcaggactgcaaatacctacagaccaccattgacttcaacattggcaaagaggccttc
tcgtgtagtggcaaaaccctgatatcagcaggttacactgtagtgatgccatggcagggc
attcctctggaagaggccatgcctgtttgtgagcgtggagacacgttcacagtggacgag
atcaagctggtggaaaagcagaccagccccccagactacctgaccgaggctgaactcatc
accctcatggagaaacatggcattggcacagatgccagcattcctgtccacatcaacaac
gtctgccagaggaactatgtgaccgttgagaatggacgcaagttgaagccaaccaacctg
ggcattgtcctggtccatggttactacaagacagatgcggagctggtgcttcccactata
cgtagcgctgtggagaagcagctgacccttatctccctgggtaaggctaacttccagcag
gtcctgcaacacacgctggacatcttcaagaggaagtttcactactttgtggactccatc
cccagcatggatgagttgatggaggtctccttttcccccattgctgcctccgggaagccc
ctgtctcgctgtggcaagtgtcaccgcttcatgaagtacatccaggccaagcccagcagg
ctccactgttcccactgcgacgagacctacagtcttccccagaatggagccatcaagctg
tacaaggagctgcgctgtccactggacgagtttgagctggtgctgtggacctctggatcc
cggggcaaaagctaccccctgtgtccgtactgcttcagcaacacgcctttcagggacatg
aagaaaggtatgggatgcaatgaatgtacccatccttcctgtcagcactctctcaactcg
ttgggcattggacagtgtgtggagtgtgatggtggggttttggtgctggatcccacttct
ggaccaaaatggaagatggcatgtaataaatgcaacgtggtggtgcacttctttgaacat
gcacacagagtgcaggttgctcaggagagctgcgatgcctgcgacgcctctctggtcgcg
gtggacttcaacaagactcgtactccacttcctgtcggcgagacccaacacactggctgc
gttttctgtgatccagtcttccaggatctggtggagctcaaacatgccaccatgaggcac
gccatgtacaggggtgggggtgcgagacgaggaggacggggacgtggcagaggacgccgg
ggcaatcctaaaaaacctaaagacaaaatggctgccttggcagcttactttgtatag
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