Cyclopterus lumpus (lumpfish): 117739456 Help Entry 117739456         CDS       T09199                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum04510   Focal adhesion clum04512   ECM-receptor interaction clum04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:clum00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117739456  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     117739456   09142 Cell motility    04820 Cytoskeleton in muscle cells     117739456  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:clum00535]     117739456 Proteoglycans [BR:clum00535]  Extracellular matrix (ECM) proteoglycans   Others    117739456 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  117739456 NCBI-ProteinID:  XP_034401758 LinkDB All DBs Position 11:17687291..17707253 Genome browser AA seq 927 aa AA seqDB search MSACVALLSLLLAPAFGQLDLNRLDGDNVCPPMRSGQDDLPGFDLITQFQLDVIPLKGVR KVDGSTTLQVAYRLDREANFQIPTMLNFPRGFPDEYSVMVTFRMIKSTVSKVWNVWQIVD EDGYKQAGLRLNGDLQSLEYYLMGADGNLQTVTFPGLSVLFNTKWHKVMIGVERDQVTLY VDCQPVDQRPIKGKGPINTEGDTLIGRLDADPDASVVFELQWMLIHCDPKRAQRESCSEL PATEMYANAEPDKSLQGPPGVPGQEGPRGSAGENGRDGRDGLPGSTGSPGNPGGKGEQGE IGLPGQRGLPGLQGSGGSSGPMGPRGPVGERGLPGFPGPPGPTGPASEGPAGPPGKAGIP GDEGNIGPEGQPGPRGATGPSGSSGPPGPPGPAGPPGASIEGIGEACPAACPAGRQGMAG LPGVKGHAGLPGEPGKDGESGEKGEAGEEGAQGPPGRMGDDGQRGSIGFPGALGEKGDRG PPGFNGVPGPTGPPGAPGVEGVRGRQGLEGPHGDEGALGPQGEQGATGEKGDTGASGKDG LDGLPGSDGAKGEAGTAGALGARGIVGIPGLPGKQGLVGPSGPQGHAGEEGSVGPVGLPG KMGEPGNDGEDGKQGDKGANGETGKQGPVGAAGPPGIHGEKGDKGYTGASGLKGHPGHKG DQGAMGPMGPKGSLGDTGMMGDSGIKGDQGPPGVTGIKGERGEKGLRGATGDEGRPGQTG HEGLAGPMGARGLDGEPGLPGTSGPRGLPGPKVNDEKLREMCSAVVEEQLAEFMKEFLKK PAAIGSPGTAGPAGLPGPVGPAGVAGPAGPPGMNGVKGHPGFYGLPGAPGKKGDAGDKGD KGGKGEDGVGIKGSPGAPGAPGAPGAAGIGTDGKNGQRGETGSPGVPGAAGARGPSGSPG LCDPSTCIGRLPPFYMVGGKKSDSYKN NT seq 2784 nt NT seq  +upstreamnt  +downstreamnt atgtcggcctgcgtggccctgctgtccctcctcctcgctcctgcattcggacaactagac ctcaaccgattggatggcgataatgtctgcccgccaatgagaagtggacaagacgacctt ccaggtttcgatctgatcacgcagttccagctggatgtgatccctctgaaaggtgtgagg aaggtggacggctccacgaccctgcaggtggcctaccgcctcgacagggaggccaacttc caaattccgaccatgctgaactttcctcgcggcttccccgacgagtactccgtcatggtg accttccgtatgatcaagagcacagtgagcaaagtgtggaacgtctggcaaatagtggac gaggacggctacaaacaggctggactgaggctcaacggggacctccagtctctggagtac tacctgatgggcgcagacggcaacctgcagaccgtcacctttcccggcctctctgtgctc ttcaacaccaagtggcacaaggtgatgatcggcgtggagcgcgaccaggtcactctgtac gtggactgccagcctgtggatcagagacccatcaagggcaaaggccccatcaacacggag ggagacacccttattggcaggctggatgccgaccccgacgcctccgtagtgtttgaactc cagtggatgttgattcactgcgacccgaagagggcccagagagagagctgcagcgagctg cctgccaccgagatgtatgccaatgctgagcctgacaaatcactccaaggccccccagga gtccccggccaagagggcccccgagggtccgcaggagaaaatggcagagacggaagagac ggtcttccaggttccactggcagtccgggaaaccctggtggcaaaggagagcagggggag atcggtcttcccggacagagaggcctgcctggccttcaaggatctggtggttcttctggt ccgatgggtcccagagggcctgtaggggagagaggactccccggctttcctggacctcca ggtccaactggaccagcaagcgaaggacccgctggacccccggggaaagcgggaatccca ggagatgaaggaaacatcgggccggagggtcaacctggacccagaggggcaaccggcccc tcagggtcttctggtcctcctggtccaccagggcctgcgggaccgcctggtgccagcatt gagggaattggggaagcttgtcctgctgcctgccctgctggccgacaggggatggccggg cttccaggggtaaagggacatgcaggtttgcctggtgaacccggaaaagacggagagtct ggagaaaagggagaagctggagaggaaggtgctcaggggccaccaggacgcatgggagat gatgggcaaagggggtccattggattccctggagctctgggagaaaagggagacagaggt cctcctggtttcaatggtgtccccggaccgaccggcccacccggagcgcccggcgtggag ggagtccgtggacgtcaaggtttggaagggccccacggcgacgagggagcgttgggacct caaggggagcaaggtgctacaggggaaaagggagacactggggcgtctggtaaagatggc ttagatggactccctggatcggatggagcgaagggagaggctggcacagctggagctctt ggtgccagggggattgtgggtattccagggctgccgggaaagcagggactcgtcggaccc tctggtccacaggggcatgctggtgaagaggggtccgtcgggccggtcggacttcctgga aagatgggcgagcctggaaatgatggagaagatgggaaacaaggagacaaaggagcaaac ggggaaacgggaaaacaagggccagtgggggctgctggtcctccaggcatccatggggaa aaaggagataaaggttatactggtgccagtggactgaagggtcatcctggacacaaaggt gatcagggggctatgggaccaatgggaccaaaaggaagtctgggggacacgggtatgatg ggagattcagggatcaagggagaccagggcccacctggcgttactggaatcaaaggagag cgtggtgagaagggcctccgaggagctacaggagatgagggccgaccgggccagacgggc cacgagggtttggccggtccaatgggggctcgagggctggatggtgaaccgggacttcct ggaacatcaggacccagaggtctacctggcccgaaagtgaatgacgagaagcttcgggaa atgtgctcagccgttgtcgaagaacaattggcagagtttatgaaagagttcctgaagaag ccggcagccattggttcccccggtactgccggaccggcgggacttcctggtcccgtcgga ccggccggagttgcgggaccagcagggcctccggggatgaacggtgtcaaaggccatccc ggcttttatggacttccaggcgcgccgggcaaaaaaggtgatgctggggacaagggagac aagggaggcaagggagaggacggtgtaggaatcaaaggaagcccaggagcaccaggtgca ccaggtgcaccgggggctgccggcattggcacggatggcaaaaatggccaacggggcgag acaggaagccccggtgtcccgggagcagccggtgcacggggaccttcggggtctcccggc ctctgcgatccgtcgacctgtataggcagacttccgcctttctacatggtcggcgggaag aagtcggacagctacaagaactaa

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