KEGG   Cyclopterus lumpus (lumpfish): 117739492
Entry
117739492         CDS       T09199                                 
Symbol
sf3a3
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117739492 (sf3a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117739492 (sf3a3)
Spliceosome [BR:clum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117739492 (sf3a3)
 Complex B
    117739492 (sf3a3)
 Complex C
   U2 SnRNP specific factors
    117739492 (sf3a3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 117739492
NCBI-ProteinID: XP_034401812
Ensembl: ENSCLMG00005008911
UniProt: A0A8C2XEH1
LinkDB
Position
11:complement(16060476..16064854)
AA seq 501 aa
METILEQQRRYHEEKERLMDSKTKEMLHKKSTLREQINSDHRTRAMLDRYMEVSGNLRDS
YEDKDGMRKDELAAISGPNEFAEFYNRLKHIKEFHRKHPNEIAIPMSVEFEELMKARDNP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGAEKLEYISYLSSFDQLFDIPKERKNA
EYKKYLEMLLEYLQDYTDRVKPLLDQNELYGKVLIEFEKKWDNGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKAKGPKKDTERNKEISFLEAQVYEYVEILGEQRQLTHENVQRKQARTGEEREEEE
EEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKSQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagactattctggagcagcagcgtcgctaccacgaagagaaagagcggctaatggac
tccaagacgaaagagatgttacacaaaaagtccacgctgcgggaacagattaactccgac
caccgaacaagagccatgttggacaggtatatggaagtgagcggaaatctcagagactca
tatgaagacaaagatggaatgagaaaagatgaacttgctgcgatctcaggacccaatgag
tttgcagagttctacaatagactgaaacacataaaggagtttcacagaaagcacccgaat
gagatcgccattcccatgtctgtagagttcgaggagctgatgaaggcccgagacaacccc
agcgaggaggcccagaacctggtggagtttactgacgaggaaggatacggccgctacctt
gacctccacgactgctacctgaagtacatcaacctgaagggagccgagaaactcgagtat
atctcctacctgtcttcattcgaccagctttttgacatccccaaggaaaggaagaatgcc
gaatacaaaaagtatttagagatgctgctggagtatctgcaggactacactgaccgggtc
aaacctctgttggaccagaatgagctctatggaaaagtgctgatagaatttgaaaagaaa
tgggacaatgggacctttccaggctggcctaaagagacgagcagtgctttgacacacgct
ggagctcatctggacctctctgctttttcttcttgggaggagttggcgtctttgggtttg
gacagattgaagtctgccctcatggcgttgggactgaaatgtggagggactctggaggag
agagctcagaggctcttcagcacaaaaggcaaatccctggaatcgctggacccgtccctg
tttgccaagaaccccaaagccaaaggccctaaaaaagacacggagcgtaacaaggaaatt
tccttcctggaagctcaagtctatgaatacgtggagatcctcggggagcagaggcagctg
actcacgagaacgtccagaggaaacaggccaggaccggagaggagcgcgaggaagaggag
gaggagcagctcagcgagagcgagagcgaagacgaggacaacgagatcatttacaacccc
aagaacctgccgctgggctgggacggcaagccaattccttactggctctataaactccac
gggctgaacatcaactacaactgcgagatctgcggaaactacacttacaggggacccaag
gccttccagaggcactttgcggaatggaggcatgctcacgggatgcgctgcctgggaatc
cccaacaccgctcacttcgccaacgtcacacagatcgaggacgccgtctctttgtgggcg
aagctgaagtcccagaaggcgtcggagcgctggcagccggacacggaggaagagtacgag
gactcgagcggcaacgtggtcaacaagaagacctacgaggatctgaagagacaaggcttg
ctgtag

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