Cyclopterus lumpus (lumpfish): 117739512
Help
Entry
117739512 CDS
T09199
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117739512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117739512
03016 Transfer RNA biogenesis [BR:
clum03016
]
117739512
03012 Translation factors [BR:
clum03012
]
117739512
04131 Membrane trafficking [BR:
clum04131
]
117739512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117739512
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117739512
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117739512
Translation factors [BR:
clum03012
]
Eukaryotic type
Elongation factors
117739512
Membrane trafficking [BR:
clum04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117739512
Exosome [BR:
clum04147
]
Exosomal proteins
Proteins found in most exosomes
117739512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
117739512
NCBI-ProteinID:
XP_034401851
Ensembl:
ENSCLMG00005011069
UniProt:
A0A8C2XVB1
LinkDB
All DBs
Position
11:complement(3324958..3331266)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASEKMSWFKSWKVERKEGGATGVTLLEALDSILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHESLT
EAMPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPMAADNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVDKKLASGGKVTKSAQKAEKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagttccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggtcacctgatctataagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagctgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccggcaggtattatgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcaccggcacctctcaggctgactgcgccgtgttggtcgttgctgccggtgtt
ggtgagttcgaggccggtatctccaagaacggccagacccgcgagcacgccctgctggcc
ttcaccctcggcgtgaagcagctcatcgtcggagtcaataagatggactccaccgagccc
ccttacagccagaagcgctttgaggaaatcaccaaggaagtcagcacctacatcaagaag
atcggctacaaccccgccaccgtcgcctttgtccccatctccgggtggcatggagacaac
atgctggaggccagcgagaagatgagctggttcaagagttggaaggtcgagcgcaaggag
ggcggtgccaccggtgtcactctgctggaagctctggactccatcctgcccccctcccgc
cccacagacaaggccctgcgcctgcccctgcaggacgtctacaagattggcggtatcgga
actgtccccgtcggccgcgttgagaccggcatcctgaagcccggcatggtcgtcaccttt
gcaccccccaacctgaccaccgaggtgaagtccgtggagatgcaccacgagtctctgaca
gaagccatgcccggcgacaacgtcggctttaacatcaagaacgtgtccgtcaaggagatc
cgccgcggcaacgtggccggagacagcaagaacgacccgcccatggcggccgacaacttc
accgcccaggtcatcatcctgaaccaccccggtcagatctcccagggttacgcccccgtg
ttggactgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgat
cgtcgttccggcaagaagcttgaggacaaccccaaggctctgaagtccggagatgccgcc
atcatcaccatggtgcctggaaaaccaatgtgtgtggagagcttctcccagtatccccca
ctgggtcgcttcgctgtgcgcgacatgaggcagaccgtggccgtcggcgtcatcaagtcc
gtcgacaagaagctcgcctccggcggcaaggtcaccaagtccgcacagaaggccgagaag
aagaaatga
DBGET
integrated database retrieval system
