Cyclopterus lumpus (lumpfish): 117740969
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Entry
117740969 CDS
T09199
Symbol
katnal2
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117740969 (katnal2)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117740969 (katnal2)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117740969 (katnal2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
TIP49
AAA_5
AAA_14
AAA_24
AAA_22
NPHP3_N
Mg_chelatase
RNA_helicase
nSTAND3
AAA_7
IstB_IS21
AAA_28
Parvo_NS1
AAA_25
DUF815
AAA_33
AAA_17
PhoH
NB-ARC
AAA_18
Motif
Other DBs
NCBI-GeneID:
117740969
NCBI-ProteinID:
XP_034403549
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All DBs
Position
12:14278184..14285896
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AA seq
523 aa
AA seq
DB search
MMELSFQSMKVSHQAREADELRTETRRKSLLILIYQHLLGQGYLSAAVALDQETNGGVRR
FEVCDNIDLEMVLMDYESYHYIKFQRYPKLIRKTTEPGEKRKTRSGGVKRSPCSVGRPLP
KINQSPSTQSGFGAKRNASCSHTNENVSSGPPESSEFGLNVSSIRNGPAGEEAMNRKDQM
TDGKSSSYDTVKGAGSDSEHMERLLKPLSGFSGMTSEMSELAAIISRDIYLHSPNVRWED
IIGLEDAKRLVKEAVVYPIKYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTF
FNISASSIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTSMGGEHEGSRR
MKTELLVQMDGLARSEDLVFVLAASNLPWELDHAMLRRLEKRILVSLPSSPARQAMISHW
LPPLSSTGGVELRTELDYETLAKEMEGYSGSDTRLVCKEAAMRPVRKIFDALESHKDGDT
DMLAIQLETVTTADFLEVITHTKPSAKNLVDRYAAWEREYESV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctttcatttcaatccatgaaagtctcccaccaagcccgggaagcggatgag
ctgaggactgagacaaggaggaagagtctcctcatcctcatttaccaacacctactgggt
caaggctacctgtctgcagcagtggccttggaccaggagacgaatggaggtgtgaggagg
ttcgaggtctgtgataacatcgatctggagatggtgctgatggactacgagagttatcac
tacatcaagttccagagatatcccaaacttatcagaaaaacaacagaaccaggcgaaaaa
agaaaaacaagaagtggtggagtaaagaggagtccctgttcggttgggaggcctcttccc
aaaatcaaccagtccccgagcacacagtctggatttggagccaagaggaatgcttcatgt
tcacatacaaatgagaatgtctcttctggtcctccggagtcgtcagagtttggtctcaac
gtttcttccatcagaaatggaccagctggtgaggaagccatgaacagaaaggaccagatg
actgacggcaaaagttccagctatgatacagttaaaggagctggcagtgactcggagcac
atggaacggctgctgaagcccctcagtggcttttctggaatgaccagtgagatgagcgaa
cttgccgcaatcatcagcagggacatctatttgcacagccccaacgtgcggtgggaggac
atcatcggcctggaggacgcaaagcgattagtcaaagaggccgtcgtctatcccattaag
tacccccagctgtttacaggcatcctgtctccgtggaaaggcttgctgctctacggcccc
ccaggcacaggtaagacgctgttggccaaggccgtggctacagagtgcaagacgaccttc
ttcaacatttcagcctccagtatcgtcagcaagtggagaggagactctgagaagctggtc
agggttctgtttgagctggccaggtaccacgccccatccaccatcttcctggatgagctg
gagtcggtgatgagccagagaggaaccagcatgggaggagagcatgagggaagtcgcagg
atgaagacggagctgctggttcagatggacggactggcgagatctgaggaccttgtgttc
gtactggctgcctccaacctgccatgggaactggaccacgccatgctgaggaggttagag
aagaggattttagtaagcctcccctcctcgccagctcgccaagccatgatctctcattgg
ctgcctcctctcagctccacaggaggggtggagctacgaactgagctggactacgaaact
ctggcgaaggagatggagggttactctggttctgatacaagactggtgtgcaaggaggcc
gccatgagaccagtccgcaagatctttgatgctctggagtcacataaggatggagacacc
gacatgctggccattcagctggaaactgtgaccacagccgacttcctggaagtcatcacg
cacaccaaaccctcggccaagaacctggtggacagatacgcagcctgggagagagagtac
gagtctgtctga
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