Cyclopterus lumpus (lumpfish): 117742576
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Entry
117742576 CDS
T09199
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117742576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117742576
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117742576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
117742576
NCBI-ProteinID:
XP_034405971
Ensembl:
ENSCLMG00005023110
LinkDB
All DBs
Position
14:16932482..17153683
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AA seq
407 aa
AA seq
DB search
MEGDGSQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRGARGRGGYLAYPQSTGPGLPDYGFYSTPSDQRGGP
CSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGANPSRPGGFPGANSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFGPSITGPLIATAFTNGYH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatccggaagcctaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgc
tcaagaggatttgggtttgttacatttacagatgctgccagtgtagataaagtcttagct
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttccacgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatttttgtgggtggcttgtcagccaat
acagtagtggaagacgtgaagcagtatttcgaacagtttgggaaggttgacgatgccatg
cttatgtttgataagacgaccaacagacatagaggatttggcttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggtacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgctggggatgggcatgctgagctaccct
aatattgtggcaacgtacggccgcggatacactggattcgcacccagctacagctaccag
ttccccggcttcccagcaacagcatacggaccggtggcggcagcggcggtagcggcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcaca
gggccaggcctccccgattatgggttttactctacgcccagtgaccagaggggggggccc
tgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcaatttaag
aacccaggcgccaacccgtcaaggcccggaggtttccccggtgctaacagtccagggcct
gtggctgacctgtacggacctagcagccaggattcagctgtgggcaactacatcagtgcc
gctagccctcagcctggctccgggtttggccccagcatcaccggcccgttgattgcgaca
gcttttacaaatggataccattga
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