Cyclopterus lumpus (lumpfish): 117745135
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Entry
117745135 CDS
T09199
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117745135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117745135
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117745135
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117745135
NCBI-ProteinID:
XP_034409120
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Position
2:4693066..4697473
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AA seq
548 aa
AA seq
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MALNIPGLIMMIAFFLLVLGIGIWASVKSKKMEKNTQGGQLEVSFLANRSVSLVVGVFTM
TATWVGGAFIIGIAESVYDPTRGLIWALVPLQISISFIIGGLFFAKPMRENHYISMMDPF
QRKYGNKLTAVLAIIPLITEVVWIPPLLISLGATMSVVIDLPFSVCVWISAVVVIIYTVL
GGLYSVAYTDVIQISLVFLSLWLCVPFVLTSNVYTDITETAFNHTQQGSWLGQLESDEVW
RWIDHFLLMTFGNVAIQDFHQRTLSSSSTSTARIICFIAAGAVIIVGIPSVLIGAVAAST
DWNSTSYGSPSPYERGEAAMVLPITLQNLTPTYISAFGIGAIAAAAMSSADSVILSATTI
FTTTIYQTIRSQASDKELQWVIRVSIVAAGLVGTSLTYLDYSVMIFWILGSDLTYTIIFP
QLVCVLFIRVSNGYGAAAGYVVGVVMRVLCGEPLFGLPVILHFPGCTLENGVYVQRFPFK
SICMLSALASILVVSYVASLLFNKGILPERWDVFKVKSQEAPPPAEADSKKADGDDKCAS
EPMLDTKC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatataccaggtctgataatgatgatagcattcttcctgcttgtgttggga
atcggcatctgggcctctgtaaagtctaagaagatggagaaaaacacacaaggtggacag
ctggaggtttcttttttggcgaaccggagtgtcagcttggtagtgggagtcttcacgatg
actgctacttgggttggaggtgccttcatcattggtattgcagagtcagtctatgacccc
accagaggtctaatctgggcccttgttcctctgcaaatttccatttcctttatcatcggt
ggactgttctttgcaaagccaatgagggagaaccattacatcagtatgatggatcccttt
cagaggaagtatggaaacaaactgactgcggttcttgccatcattcctctcataacggaa
gttgtctggattcctccattactgatttccttgggagccaccatgagtgttgttatagat
ctgcccttcagtgtttgcgtctggatctctgctgtggtggtgatcatctacactgttctt
ggcggtctctactcagtggcttacactgacgtcatccagatctcactggtgtttctgagc
ctgtggctgtgtgtccctttcgttctgaccagtaatgtttatactgacatcactgaaaca
gcattcaaccacacacaacagggctcctggcttggccagcttgagtctgatgaagtctgg
agatggattgatcattttctactgatgacttttggaaatgtggccattcaggatttccat
cagaggacactgtcctccagctccacgtctacagccaggatcatctgtttcatagcagca
ggagcagtaatcattgtaggaatcccatctgtgctaattggagctgtagcagcttcaaca
gactggaactccacctcatatggctctccttctccatacgagcgaggggaggcagccatg
gtgttgcccatcacccttcagaatttaaccccaacctacatttctgcctttggcatcgga
gctattgctgctgcagcgatgtcatcagctgactctgtaattttgtctgcaaccaccatc
ttcaccaccaccatctaccagaccatcaggagtcaggcatccgataaagagctgcagtgg
gtgatccgtgtctccatagtggctgcaggacttgtgggaacatccctcacctatctggac
tacagtgtcatgattttctggatcctgggctcagacctgacttacaccattattttcccc
cagctggtctgcgtcctcttcatcagggtttccaacggttatggggctgctgcaggctat
gttgttggagtggtgatgagagttttgtgtggagagccgttgtttggcctccctgtgatc
ctacatttcccaggatgcactttagagaacggtgtttatgttcagcgttttcctttcaag
tccatctgcatgctgtctgctctggcctccatcttggtggtttcatatgtggcctcactc
ctgtttaacaaggggatccttcctgagaggtgggacgtgttcaaggtgaagtcacaggaa
gcaccaccaccagcagaggctgatagtaaaaaggctgatggagatgataaatgtgcttct
gaaccgatgttggacacaaaatgctga
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