Cyclopterus lumpus (lumpfish): 117745972
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Entry
117745972 CDS
T09199
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117745972 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117745972 (arhgef18a)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117745972 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
PH_13
ATG16
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
117745972
NCBI-ProteinID:
XP_034410563
Ensembl:
ENSCLMG00005009552
UniProt:
A0A8C2XHV0
LinkDB
All DBs
Position
17:complement(12649051..12666066)
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AA seq
966 aa
AA seq
DB search
MTVTPKKHRIQPGSSSFNNTSPRSSPVQMDEVEGLRLKLIPEDSVSLASSLAEPINLEDS
HYALLRGELESDRQNLEAESWGLAVDQNYLRALTKEAVKRQEVIYELIQTEKHHVRTLKI
LLHVYMHQLKKSSLLEEARLERLFPVVEDLLMVHQHFLDCLKVRKHQSQEEGSSHNYQIT
QLGDILISQFSGALGERMMGYYSQFCSNHSEAISLYKEQLQSNKKMQLLIRKIGQLPLVR
RLGIPECFLLVTQRITKYPVLVERIIENTEADTDEYKSLVQGLALIKDTISQVNDQVREY
EKATRQREIALRLEPKSQGRLKDGRLLRREDLIHGNRTLIHEGTFTWKSSGRQKEIHAVL
LSDVLLLLQEKDQKLVFAAVDNKPPVIALEKLIVREVAHEDKAMYLISECTTSTPEMYEI
HTPSREECITWTALIREAVNCYPEEELYLQLTATLQQFQDNLKMRDELIMQSLAEKQQLF
AALYETITEQETPHKGLLLRGDATDLQQGTTLLKGAINEVENLQNLLFTRIKDPNLLMEV
NETQEGLLWKAETFVVADGNPDENGEAAHTTIDPQLQESYCSASLEPSTDDNTQTPNCSF
TTSHFSEAEVCDKVILLAQRLYSLEAIIAQQDSQIELQHAFQTKSRQPARHYSSVLLEQE
KQRNSEKQKEKLANMHKLQAQHREEQQRWEKEKEQQRMQIESLEARLQHREVDCREWEEK
LNKEKAELESLKESYQEDLERLRESTKSVDRDKERLNQERERLEQLQEKIKKFYPGNYDD
PAQFLSLSSHQSFRGSIVNGGGTSTLKPHLMLTNSNSLEIPPKVPPRRESMSPLQVHLIS
PTNQLHKSASMQQQQIPTKLAALSKGKDKVSKKKGSHQRTHSAASIDVNQVLPIRVTGKE
GGSLRAKSNSRPSTYQSGAFNLPGSVHSGKISQSFSTQKRSNEAPPPPPPFPSEVLDAGK
EKVTFL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttacccctaaaaaacacagaattcagcctggttcctcctctttcaacaacaca
agtcccagatccagtcccgtgcagatggatgaggtcgaaggcctccgattgaagctcatc
cctgaggactctgtgtcactggcttcctctttggctgagcccatcaacctagaagattcc
cattatgctctgctgcgaggagagctggagtccgaccgccagaacctggaggcggagtcg
tggggcttggctgtggaccagaactacctgagggccctgacaaaagaggctgttaagaga
caggaagtcatctatgagttgatccagacggagaagcaccatgtacgcaccttaaaaatc
cttctccatgtctacatgcaccagttgaagaagtcttcgctgttagaggaggccaggcta
gagaggctcttccctgtggtggaagacctgctcatggtccaccagcacttccttgactgc
ctcaaagtacgcaaacaccaaagtcaggaggaaggaagctcacacaactaccagatcaca
cagctaggagatattctcatctctcagttttcaggtgcactgggagaaagaatgatgggg
tattacagtcaattctgcagtaatcacagtgaagccatcagtctctacaaagagcagctg
cagagtaacaagaaaatgcagctccttattaggaaaatagggcagcttccccttgtgcga
cggttgggaatccctgagtgttttctgttggttactcaacgcatcacaaaatatcccgtc
ctggttgagcgaatcatcgagaacactgaagcggacacagacgagtacaagtctctggta
cagggtttggcgctgatcaaagacaccatctcgcaggtgaacgatcaggtcagggaatac
gagaaagccactcgtcagagagagatcgcccttcgtctggagccaaaatctcagggccga
ctgaaggacggccgactgctccgcagggaggatctgatccatggcaacaggacactgata
catgaaggcaccttcacctggaagtcctccgggagacaaaaagaaattcatgctgtgctg
ctgtcagacgtgctcctcctcttacaagagaaagatcagaagcttgtgtttgctgctgtg
gataacaaacccccagtgatcgcccttgagaagctaatagttagggaggtggctcatgag
gacaaagccatgtaccttatctctgaatgcaccactagcacgccggagatgtacgagatc
catacgccctccagggaggaatgcatcacatggacggctctcatacgagaagctgtgaac
tgctatccagaagaggagctgtaccttcaactgactgctacactgcaacaatttcaagat
aatctaaagatgagggatgagctgataatgcaaagtctggcggagaagcagcagctcttt
gctgctctctacgagacaattacggagcaggaaaccccccataaagggctgctgctccga
ggtgacgccactgacctccagcaggggacgactctgctcaaaggagccatcaatgaggtg
gaaaacctgcagaacctgctcttcacgaggataaaagacccaaaccttcttatggaagtg
aatgagacgcaggaggggctgctctggaaggccgagacctttgtagtggctgatggtaac
cctgatgaaaacggagaagcagctcacaccactattgaccctcagctccaggaaagttac
tgctctgcgagcctggaaccgtctactgatgacaacacacagacaccaaactgcagtttc
accaccagtcatttttctgaggcagaggtgtgtgacaaggtgatactgcttgcacagagg
ctgtacagcttagaagcaataatcgcccagcaggacagccagattgagctgcagcacgct
tttcagacaaagagcaggcagcccgctcgtcattacagcagtgtgctgctggagcaggag
aagcaacgcaactcggagaagcagaaggagaagcttgccaacatgcacaagctgcaggcc
cagcatcgagaggagcagcagcgctgggagaaggagaaggagcagcagaggatgcagatt
gagagtctagaggctcggttgcaacatagggaggtggactgtcgagagtgggaggagaag
ctcaataaagagaaggctgagctggagagcctgaaggaaagctatcaggaggacctggag
aggctgagggagtccacaaaatcagtagacagggacaaggagcgtctaaatcaggagagg
gaacgtctcgaacagctgcaggagaagataaagaagttctacccgggaaactatgatgat
cctgcacaattcttgagtctctccagtcaccagtcgttcaggggaagcatagtgaacgga
ggtgggacctcaactctgaagccccacttgatgctcacaaactccaactccttggaaatt
cctccaaaggttccaccgcgcagggagagcatgagccccctgcaggtccacctgatcagc
cccaccaaccagttacacaaatctgcgtccatgcagcagcagcagatccccaccaagttg
gctgctctgtccaagggaaaggacaaagtctcgaagaagaaagggtcgcaccagagaaca
cacagtgcagcctctatagacgttaaccaggtgctgcccatccgagtgaccgggaaagaa
ggaggcagtctgagagccaaaagtaacagcaggccatcaacctaccagtcaggtgccttc
aacctaccaggatctgtccacagtgggaagatatctcagtccttcagcacgcaaaagagg
agcaacgaggctccaccaccaccgcctccttttccttctgaggttctcgatgcgggcaaa
gagaaggtaacattcctttaa
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