Cyclopterus lumpus (lumpfish): 117748155
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Entry
117748155 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-secretase subunit Aph-1b-like
KO
K06172
gamma-secretase subunit APH-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117748155
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Gene cluster
GFIT
Motif
Pfam:
Aph-1
Motif
Other DBs
NCBI-GeneID:
117748155
NCBI-ProteinID:
XP_034413680
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Position
18:complement(11538337..11541299)
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AA seq
265 aa
AA seq
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MATWFQDTDWLGKLCYLADIFSKLKELNVSLQGKDTSILNLYDKVGAFLKKAELWRRAFF
WLVSLLLASLVWFISVHXQQKGLLVFGVVLSVLLQEAFRFDYYKLLKKTNEGLLTLSQEE
TMPISIRRWPTVPFSPHIFSVVNILADSVGPGTIGIHGDSQHYFLSSAFMTMAIILLHMF
WGVVFFDGCEKQRWWAVAAVVASHLMVSCLTFQNPEYVGSLVPTYIILFLMGVWAFYAAA
GSLRNLKLCLTCKDKDFLLANHRSR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctggttccaggacacagactggcttggaaagctgtgctatctggcagatata
ttcagcaaacttaaggaactgaatgtgtctctgcagggcaaggacaccagcattttaaac
ctgtatgacaaggtgggtgccttcctgaagaaagccgagctgtggagaagagcgttcttc
tggctggtgtctctgctgctggcgtccctggtttggttcatctccgttcatnatcagcag
aaggggctcctggtgttcggtgtggtgctctccgtcctgctgcaggaggccttccgcttc
gactactacaagctgctgaagaaaacgaatgaaggcctcctcactctcagtcaggaggaa
accatgccgatctccatacgacgctggcctacggtaccttttagtcctcacatcttctcg
gtggtgaacatcctggcggactcggtggggccgggaaccatcgggatccacggagactct
cagcactactttctgtcctcggccttcatgacgatggccatcatcctgcttcacatgttc
tggggcgtcgtcttctttgacggctgcgagaagcagcgctggtgggcggtggctgctgtc
gtcgccagccacctcatggtttcctgtctgaccttccagaaccctgagtacgtcggcagc
ctggttcccacctacatcatcttgttcctgatgggcgtctgggccttctacgccgccgcc
ggctccctgaggaacctcaagctctgcctcacctgcaaagacaaggacttcctgctcgcc
aaccaccggtccagataa
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