KEGG   Cyclopterus lumpus (lumpfish): 117750114
Entry
117750114         CDS       T09199                                 
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like isoform X1
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:clum04040]
    117750114
Ion channels [BR:clum04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   117750114
SSDB
Motif
Pfam: Ion_trans ARM_TT21_2nd ARM_TT21_C ARM_TT21 ARM_TT21_5th ARM_TT21_N Na_trans_assoc Na_trans_cytopl ARM_TT21_4th TPR_19 TPR_14 TPR_2 TPR_8 TPR_1 TPR_16 TPR_6 TPR_12 TPR_11 ANAPC3 TPR_7 TPR_CcmH_CycH TPR_9 IQ_SCN5A_C GPHH Wzy_C_2 PKD_channel TPR_Slam PknG_TPR Neur_chan_memb New_glue PFF1_TM Zip
Other DBs
NCBI-GeneID: 117750114
NCBI-ProteinID: XP_034416962
Ensembl: ENSCLMG00005022262 ENSCLMG00005022346
LinkDB
Position
21:complement(11459388..11495854)
AA seq 3137 aa
MAQLLVPPGPDSFHPFSRESLKAIERRITEENAKKPKAEKRKHDDENELKPSRDLEASKS
LPLLYGDTPKGLVSTPLEDLDPYYCNQKTFIVLNTGNVIFRFNANPALYLLSPFNLLRRI
SIRILVHSLFSMVIMCTILANCAFMTLSGPPDWAKNVEYTFTAIYTLESLIKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYVTEFVNLGNFSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKKLADVMILTVFCLSVFALIGLQLFMGHLKQKCVRTIVNSTSSYNGTDINGTEQSD
FDWKAYTLNSSNHYFLPDKRDPLLCGNGSEAGRCPEGFTCIRAGKNPDYNYTSFDSFGWA
FLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEEQSQ
ATMKEAVEKEEEFQAMLEQLKRQQEDAQAAATVAAAESGEASDKVTGPESSSDTSKLSSK
SAKDRRNRRRKKKEEEGKGADEKDPKSESQDSMRKGRCRFSVDANQLNYDMKCSSVHQSF
LSFRGPLFSSRRNSRTSLFSFRSQAQDMVSENEFADDENSIFEDNLSRRDSFFLPRGCDR
RSSSMSQRSFLSHLLLSPNGIKHSSVDCNGVVSLVGGNSLPSSPVGLLLPKVTVDMASTG
DNADTTDTEYRQASGGTHQEFMDHLEGPEARQRAHSTASVITSTMEELEESRQRCPPCLH
TFAHTFLIWECCPAWLMIKRVVKLIVTDPFVDLAITICIVLNTMFMAMEHYPMSNGFINM
LYVGNVIFTGIFTAEMVLKIIAMNPYYYFQERWNIFDGIIVTSSLMELFLENVVGMSVLR
SFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKYYKDC
VCKISTECTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGTHMCITVYMMVMVIG
NLVVLNLFLALLLSSFSADNLAATEDDSDMNNLQVAIERIHKGIAFVKNLLRSSCNSVCL
RRKKKGKGEEKSLDELHKPLGPNGIPNSTIKDFPRNGNGDVTGVDKNGDKYIVSSKSDDS
IMSFINNPSLTVTVPIAVGESDFENLNTEDFSSASSDAAGCHVIVDDDGQLSSSEGSTID
CGPGGEGGESVDFELEESMEPDACFPDVWVQKFQCCQVNAEVGWWKVWWMVRKTCYRIVE
HNWFESFIIFMILLSSGALAFEDVYIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGY
AKYFTNAWCWLDFLIVDVSLVSMVANAMGYSELGAIKSLRTLRALRPLRALSRFEGMRVV
VNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGRYGHCVDQLSMPKKDFLASEVKNKT
ECENLGKEAARWKNVKINFDNVGMGYLALLQVATFKGWMDIMYAAVDSQSKQNEQPEYEI
NLKMYMYFVVFIIFGAFFTLNLFIGVIIDNFNQQKKKINIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPSNKIQGYIFDLTTKQAFDIIIMVLIWLNMVTMMVETDDQSDEKAKILHDINI
FFIMVFTGECLLKMIALRYYFFTNGWNVFDFIVVVLSIIGMFLSSLIEKYFVSPTLFRVI
RLARIGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRE
AGIDDLFNFETFGNSMICLFQITTSAGWDGLLAPILNKHEDDCNSTTEHPGSRVKGDCGN
PPVAITFFVSYIIICFLIVVNMYIAVILENFSVATEESADPLSEDDFETFYEVWERFDPR
ATQFMEYKKLSEFADALDPPLRIAMPNKMELISMDLPMVSGERIHCLDILFAFTKRVLGE
GGEMDILRAEMEERFMASNPSKLSYEPITTTLRRKQEDTSATIIQRAFREEVIQELDAKV
KEDRKSASPKSLYYAGMFLWLLGRNDKAREYTERMIKLSSGSREGMILKAWIDVTSGKDA
YARKAGKYFDEGLKERADVFALMGKAQYYEYRQNYSGALEMVNKVIVSFPGFLPALTKKM
KLLLCLQDWEQTINASHRLLQKDTNNLEALRMLALHSLCRDGDITESVKQLSNLISSLEI
LEPHNPELFYRMSLAFTRVCGRNEKLMEQTFRMVERAFSVASGDSDVATELGYQMVLQGR
IKEAMKWYKTAMTLDETSVSALTGIIRCQLIEGHLEDAEQQLEFLTEIQQSIGKSGELLY
LRAVLAVKKRRSQEEVTNLLNDAVDTHFSTLQGLPLGVEYFEKLNPDFLLEIVKEYLAMC
PAKPPAQGQPPAPQLQHCATLLDTVVKIVPGLLQGVFLLAKVRYQSGDIEAAQSNLQHCL
DQCPSHADAHLLMAQIHQLQGNFSLSSQSLELCLSHNFEIREHPLYHLINAQAKKKMGEL
TEAIQTLQMAMSLPGVRRAGSSSKSKSKKIELSPSDCLSVFLELAEALWLNGEQHEAAKV
MQDAINEFSGTPEELRVTIANADLALLRGDTELALSMLRNITPEQPYYIQAKEKMADIYL
NHRKEKRLYASCYREMVEKLPSTHTYLLLGDAYINIQEPEKAIDVYEEALKKNPKDGALA
SKIGKALVKTHNYAKAINYYEAALKTEQQKFLRYDLAELLMKMKQYQRCEKVLHEALAHE
PANELLALSDDCRYLVLLAKVQNKVDKNEEALLSLQRARDVQAKVLKRVQLEQPDAVPVQ
KQLAAEICAEIAKHYTSQRGYERAVKFYKEALVYCETDRKVMLELARLYLTLDEVDACQE
QCGVILKNDQFNEDAILMMADIMFRKQDYEQAVFHFQQLLERKPDNYPTLSRLIDLLRRA
GKLEEVPRFIDMAEKHSSRTKFDPGFNYCKGLYLWFTGEPNDALRHFNKARKDNDWGQNA
VYNMIEIYLNPDNDTLGGEVFENLDGEIGNSTEKQESEQVAVRTADKLLKELKPQTPGGN
VQLRILENYCFLATKQKANVEKALGVFTEIANNEKEHVPALLAMATAYMMLKQTPRARNQ
LKRIAKMNWSIVDADEFEKSWLLLADIYIHLGKYDMAGELLKRCLNHNKSCCKAYEYLGY
IMEKEQAFRDAALNYELAWKYGNRTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLAAHPNY
PRMRKDILDKARVALRS
NT seq 9414 nt   +upstreamnt  +downstreamnt
atggcacagctacttgtaccaccaggtccagacagcttccacccctttagtcgcgagtcc
ctcaaagccatcgagagacgtatcacagaggagaacgccaagaagcccaaggcagagaag
agaaaacacgatgatgagaatgagctcaagcccagtcgtgacctggaggcgagcaaatcc
ctccctcttctgtatggggacactcctaaaggcctggtgtcgacaccgctggaggacctg
gatccctactactgcaatcagaaaacttttatagtattaaacacaggaaatgtcatcttc
cgcttcaatgccaatcctgccttgtacctcctgagccccttcaacctccttagaagaata
tcaataaggattttggtacactcattgttcagtatggtgatcatgtgcactatcctcgcc
aactgtgcatttatgacactgagtggaccgcctgattgggcaaagaatgtcgagtacaca
ttcaccgcaatttatacgcttgaatccctcattaaaattttagctcgagggttctgcata
ggaaagttcacctttctaagagatccctggaactggctggatttcagtgtaattgtcatg
gcgtatgtaacagagtttgtaaacctaggcaatttttcagcacttcgcacattcagagtg
ctaagagcttttaaagctatttcagttatcccaggcctgaagaccatcgttggtgcattg
ttccagtcagtgaagaaacttgcagatgtgatgattctcaccgtcttctgcctgagcgtc
tttgccctcatagggttgcaactgtttatgggacatttaaagcaaaagtgtgtacggaca
attgttaattccacctcatcatacaatgggactgacataaatggaacagaacaaagcgat
tttgactggaaagcgtacacgctcaatagcagtaatcattatttccttccagacaaacga
gatccactgctttgtggaaatggcagcgaagctgggcgctgtccagaggggtttacttgc
atcagagcgggaaagaacccagactataattacaccagttttgactcctttggttgggcc
ttcctctctctgtttagactgatgacacaggattactgggaaaacctttaccagcagacg
ttgcgggcagctgggaagccctacatgatcttttttgtgctggtgatattccttggttcc
ttttacctgatcaacctgatcttggccgtagtagccatggcctacgaggagcagagccag
gccaccatgaaggaggcggtggagaaggaggaagagtttcaggccatgcttgagcagctg
aaacggcagcaggaggacgctcaggcagcagcaactgtagctgctgcagagagcggggag
gccagcgataaagtcactggccctgagagctcctctgacacctccaagcttagctccaaa
agtgccaaagacagacgcaacagacgaagaaagaagaaggaggaggagggcaaaggggct
gatgagaaggatcctaaatctgagtcacaggacagtatgaggaaaggtcgctgccgcttc
tctgtggatgcaaaccagctcaactatgacatgaaatgctcatccgtacatcagtccttt
ctgagttttcgtggacccctcttctcatccagacggaacagcaggaccagccttttcagt
ttccgaagccaagcgcaggatatggtctcagaaaatgagtttgcagatgatgagaacagc
atttttgaggacaacctgagtcggagggactctttttttcttcccaggggttgtgatcga
cgcagcagcagtatgagccaacgcagtttcttgtcgcatctcctactttcacccaatggg
atcaagcacagctctgtagactgcaatggcgttgtttctctggtgggtgggaattccctc
ccatcgtcacccgtggggctacttctgcctaaagtgacggtagatatggcctccactgga
gacaatgctgacactactgacacagagtacagacaggccagtggtggaacacaccaggag
tttatggaccacctcgagggcccagaggccagacagagagctcacagtacagctagtgtc
ataaccagcactatggaggagcttgaagaatcgaggcagaggtgtcctccttgcttgcac
acttttgcccacactttcctcatctgggaatgttgtccagcatggctgatgatcaagagg
gtggtgaaactaattgtgacggatccatttgtggacctagccatcaccatctgcattgta
ctcaacacaatgtttatggccatggagcattatccaatgtccaacggcttcatcaacatg
ctgtatgttggaaatgtgatattcactggcatcttcacggctgaaatggtcctcaagatc
attgctatgaacccatactattacttccaggagagatggaatatttttgatggaatcatt
gtcacttcaagcttgatggagctttttttggaaaacgtggttggcatgtctgttctaagg
tcattcagattgctaagagtattcaagttggctaaatcgtggcccacacttaacacattg
atcaaaataattggtaattcagtgggggctttgggcaacctgacgctggtgttggccatt
atcgtcttcatctttgctgtggtcggcatgcagctgtttggaaaatactacaaggactgt
gtgtgtaaaatctctaccgaatgcacacttccccgttggcacatgaatgacttctttcat
tcattcctcattgtgttccgagtgctttgtggagagtggatagagaccatgtgggactgt
atggaggtggctgggacccacatgtgcatcactgtctacatgatggtcatggttattgga
aaccttgtggtgctgaacctgttcctggccctgctgctgagttcattcagtgctgacaat
ctcgcagcgacggaggacgacagcgatatgaacaatttgcaggttgccattgaacggatt
cacaaaggcattgcctttgtcaaaaatctgcttcgaagcagctgcaacagtgtctgtctc
aggaggaagaagaaagggaagggtgaggaaaaatctctggatgagctccacaaacctcta
gggccgaatggtatccccaacagtactatcaaagactttccgaggaacggaaatggggat
gtgaccggagtggacaaaaatggagacaagtacatagtcagcagcaagagtgatgattcc
ataatgtctttcatcaacaatcccagtctgacggtcacagttcctattgctgtgggagag
tctgactttgaaaacctcaacactgaggacttcagcagtgcttcgtctgatgcagcagga
tgccatgtgattgtagatgacgatggccagctcagctcctctgagggcagcacaatagac
tgtgggccaggcggggagggaggagagtctgtagactttgaattggaagaatctatggaa
cctgatgcctgctttcctgatgtctgggtgcaaaagttccagtgctgccaggtaaatgcg
gaagtgggctggtggaaggtgtggtggatggttagaaagacctgttaccggatcgtggag
cacaactggtttgagagcttcatcatcttcatgatcctgcttagcagtggagcgctggct
tttgaggatgtctacattgagaagaggaagaccattaaaacagtgttggaatttgcagac
aaaatcttcacctacatcttcattctggagatgttactgaagtgggtggcatatggatat
gccaagtattttacaaatgcctggtgctggctggactttctcattgttgatgtctcactg
gtcagtatggtagccaatgccatgggatattctgaactcggtgccatcaagtctctgaga
accctgcgagctctgaggccgctgagagccctgtcacggtttgaaggcatgagggtggtt
gtcaatgccttgcttggagccattccttccatcttcaatgtgctgctggtatgtctcatc
ttctggcttatcttcagcatcatgggagtcaacctatttgcaggaaggtacggccattgt
gtcgaccaattgtcgatgccaaaaaaagattttctggcatcggaggtgaaaaacaagaca
gagtgtgagaatttgggcaaagaagctgctcgctggaagaacgtcaaaatcaactttgac
aatgttggcatgggttaccttgcactgttgcaagtggctacattcaagggctggatggac
atcatgtatgctgctgtggactctcaaagcaagcaaaacgaacaaccagaatatgagatc
aacctgaagatgtacatgtattttgttgttttcatcatatttggagccttcttcacactc
aatctctttattggtgtgatcatagacaatttcaatcagcaaaagaaaaagataaacatc
tttatgactgaagaacagaagaaatactacaatgccatgaaaaagctgggatcaaagaaa
ccacaaaagcctattcctcggccatcaaacaaaattcaaggatacatctttgacttaacc
acaaaacaagcattcgatataataataatggttctaatatggcttaatatggtaaccatg
atggtggaaactgacgatcaatctgatgaaaaggccaaaattctgcacgacattaatatt
tttttcattatggtcttcactggagagtgtttgttgaagatgattgctcttcgctattac
tttttcacaaacggttggaatgtatttgatttcatcgtcgtcgtcctgtcaatcattggc
atgtttctctcttctctgatcgagaagtattttgtttcaccaaccttgttcagagtcatt
cgcttggcccggattggccgtgtcctgcggcttattaaaagtgccaaaggaatccgtaca
ctcctgtttgccttgatgatgtcacttcctgccttattcaacatcggtctcctactcttc
ttggtgatgtttatctatgccatctttggcatgtcaaactttgcttacgtcaagagggaa
gcaggcatcgatgaccttttcaattttgagacatttggcaacagcatgatctgtttgttc
cagatcaccacttcagcagggtgggatggcctacttgctcccattctcaacaaacatgaa
gacgattgtaacagtaccacagagcatcctggcagccgtgttaagggtgactgtgggaat
cctcctgtggcgatcaccttctttgtgagctacatcatcatctgtttcctgattgtggtg
aatatgtacattgcagttatcctagaaaacttcagtgtcgccactgaggagagtgcggac
ccactaagtgaggatgattttgaaacgttttatgaggtctgggaaaggtttgatcctcgt
gcaacccagttcatggagtacaaaaagctctccgaatttgcagatgctttggacccacca
ttacgcatagccatgcctaacaagatggaactgatctctatggatttacccatggtgagt
ggtgaacgcattcactgcctggacatcctgtttgcatttacaaaacgtgttctgggtgag
ggcggggagatggatattctaagggcggagatggaggagcgcttcatggcctccaatcct
tcaaaattgtcctatgaacccataactaccaccctccgtcgcaaacaagaggacacatcc
gccactatcatccaaagggccttcagggaagaagtcattcaagaacttgatgctaaggtc
aaagaggatcgaaaaagtgcatctcccaagagcctgtactatgctgggatgtttctctgg
ctgttagggcgtaatgataaggcaagggagtacacggagagaatgatcaaactctccagt
ggctcgagagaggggatgatcctaaaagcctggatagatgtgacctctggtaaagacgcc
tacgccagaaaggctggaaagtacttcgacgagggactgaaagagagagcagatgtgttt
gccctgatgggaaaggcacaatattatgaatatcgtcagaactactctggagcattggag
atggttaacaaggtcattgttagtttccctgggttcctgcctgccctcaccaagaagatg
aaactgttgctctgccttcaagactgggagcaaaccataaatgcatcacacaggctttta
cagaaggatacaaataatctggaagcactacggatgctagctttacattctttatgtaga
gatggagatattactgagtcggtaaagcagctttcaaacctcatcagcagcttggagatt
ctggaaccacacaacccagagcttttctacaggatgtctctggccttcacccgtgtttgt
ggacggaatgagaaactgatggagcagacgtttaggatggtggagagggccttctctgtg
gcatcaggggactccgatgtagccacagagttgggctaccagatggtgcttcagggcaga
atcaaggaggccatgaagtggtacaagacagccatgactttggatgagacaagtgtttct
gctttgactggtataatccgttgccagctgatagagggccaccttgaggatgcagagcaa
cagttagaatttctcacagagattcaacaatcgattggaaaatcaggggagctactttac
ttacgtgccgttctggcagtgaaaaagcgccgctcccaggaagaggtgaccaatctgctg
aatgatgcagtggacacacacttctccactctgcagggtctgcctctgggcgtggagtac
tttgagaagctgaaccctgacttcctgttggagattgtcaaagagtatcttgcaatgtgt
cctgctaagcctccagcccagggccagccgcctgctcctcagcttcagcactgtgccaca
ttgttggatactgtggtcaagattgtgccaggtctcctccaaggggtcttcctgctagcc
aaagtcagatatcagtctggtgacattgaagctgctcagagcaatctacaacattgtctg
gaccagtgtccttcccatgcagatgctcatcttctcatggcccagattcatcagctgcag
ggaaacttctcactgtcttcccagtctcttgagctctgcctcagccataactttgagatc
cgagaacatcccctgtaccacctgatcaatgctcaggctaagaagaaaatgggtgagctg
acagaggctattcagacactgcagatggccatgagtcttccaggtgtccgcagagctgga
tcctcgtccaaatccaagagcaagaagattgagctgagtccttctgactgcctctctgtc
ttcttagagttagctgaggccctgtggctcaacggagaacagcatgaagcagcaaaggtg
atgcaggatgccatcaatgagttctcgggtactcctgaggagctacgtgtcactattgcc
aatgcggacctggccctgctgcgtggtgacaccgagctggcactgagtatgctcagaaac
attacccctgagcagccctactacatccaagccaaggagaaaatggcagacatatatctg
aaccacagaaaagagaaacgcctgtatgccagctgttacagagaaatggtggagaagctg
cccagcactcacacatacctcttactaggtgatgcctacattaacattcaagaacctgag
aaagccattgatgtttatgaggaagctctgaagaaaaaccccaaagatggtgctttagcc
agcaagattggaaaagccctggtcaagactcataactacgcgaaggcaataaattactat
gaagcagccctgaagacggagcaacagaagttcctgcgctacgacctggctgagctgctg
atgaagatgaagcaatatcagcgctgtgagaaagtcctgcatgaagccctggcccatgag
ccagcgaacgagctgctcgccctctcagatgattgccgttatctggtcctgttggcaaag
gtccaaaataaggttgacaaaaacgaggaagctttactttccctgcaaagagcccgggat
gtgcaggccaaggtgctgaagcgggtgcagttggagcagcctgacgccgtccccgtgcag
aaacagcttgcggccgagatctgcgctgagatcgctaaacactacacaagtcagaggggc
tatgagagagcagtcaaattctacaaagaagctcttgtgtattgtgagactgatcgcaag
gtgatgctggagttggcacggctgtaccttactctagatgaggttgatgcatgccaggag
cagtgtggcgtcattttgaagaatgaccagtttaacgaagatgcaattctgatgatggct
gacattatgttcaggaagcaggactacgagcaggcagttttccactttcaacaacttctg
gagcgcaaaccagacaactacccgacactgtctcgtctcattgacttgttgaggagggcc
ggcaagttggaagaagttcccagatttattgatatggcagaaaaacattcttccaggaca
aaatttgaccctggattcaactattgcaaaggactttatctttggttcacaggagaaccg
aatgatgctctgcggcacttcaacaaagcacggaaagacaatgactggggtcaaaacgct
gtgtataacatgattgaaatctacctaaaccctgacaatgacaccctgggaggagaagta
tttgagaatttagatggtgaaatagggaactccacggagaagcaggagtccgagcaggtt
gctgtgagaacggcggataagctgctgaaggagttaaagcctcagacaccaggaggaaac
gtacagctccgcatcctggagaactactgctttctggccaccaaacagaaggccaatgta
gagaaagcccttggtgtttttacagagattgccaacaatgaaaaagaacacgtaccggca
ctgctggccatggcgacagcttatatgatgctgaaacagactccccgagccaggaaccag
ctcaaacgcatagctaagatgaactggagcattgtggacgccgatgagtttgagaagagc
tggctgctcttggcagacatctacatccatttgggaaagtacgacatggccggggaactc
ttgaagagatgcctcaatcataacaagtcatgctgtaaggcttatgaatatctgggctac
ataatggaaaaagagcaggcgttccgtgatgcagctctcaactatgaactggcttggaaa
tatggaaatcgaactaacccaacaattggatacaagctggctttcaactacttaaaagca
aagaggcatgttgatgccatagatgtgtgtcataaggttttggctgctcatccaaattat
cccagaatgagaaaggacatcttggacaaagcgcgtgttgccctgagatcttag

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