Colletotrichum lupini: CLUP02_06499
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Entry
CLUP02_06499 CDS
T08561
Name
(RefSeq) tetratricopeptide
KO
K12600
superkiller protein 3
Organism
clup
Colletotrichum lupini
Pathway
clup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUP02_06499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_06499
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CLUP02_06499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_1
TPR_17
TPR_12
TPR_8
TPR_11
ARM_TT21_5th
TPR_7
ARM_TT21_N
ANAPC3
ARM_TT21_C
DUF4192
T7SS_EccA1_N
ARM_TT21
RPN6_N
DUF5588
TPR_COPA_B
NRBF2_MIT
E_motif
Motif
Other DBs
NCBI-GeneID:
73340508
NCBI-ProteinID:
XP_049142641
UniProt:
A0A9Q8SPC9
LinkDB
All DBs
Position
3:join(5808375..5808493,5808556..5812678)
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AA seq
1413 aa
AA seq
DB search
MSGANAVLKAIGDSVKQQKWDDAIQKATDFLEREPKNYQATIFLAFALDKKSRVDDAEKA
YKSAASLRPKDSQAWQGLIKLYEKQDRKRLAAYQQAAISLAEIYRDAEDMYKCQDVIDKF
IDFARSQGDTSQYIEALSVILPGSPIYPALEGRVPHPAKTYETMAQMIETDEKKRINTLI
GERRTRIGARLTEVTLEVKREVIAQSKLEFVYHQLINWTNDDDLRRKYEEKLLQYCYDRL
LVAPHGPEKGQALQAVLKLALDMVIIKHPFRLAWEIAIDYKDAKEIKEWDVNMLRDYCTF
FPETDLYKVITGFLTSSISPFPKPTPAALEAEETEEESEDDEGGGVSMVPLTEQDRILMM
TEGITTSNSLFAHRLMGEYYQHLEEYETTVELMRKSMGHIKTERNKTGMSFQNTHDAFSL
YLATGLVFFQSPRHHTEAKSLFEGVLSHDPSSTPALIGVGLIYEEEEDYDDAIDFFGRAL
ERDPSNLRVKTESAWVQALKGDFETAKAELEDSLPLIEEMPTPSKELLAQTQYRLGSCIW
NIDTSKAARKSRTGAYLYFLDALKNNLNFAPAYTSLGVYYADYAKDKKRARRCFQKAVEL
SASEVEAAKRLAESFADEGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFSALGVAEL
NKQDFHKSIVSFQSALRIHPEDYHSWVGLGESYYSSGRYIAATKAILNAQKLEETAPAET
LGDTWFTKYMLANVKRELAEFDEAVALYQDVIEGRPDEDGVAIALIQTMVDSALDSVEKG
LFGKAVHLAIDTIDFASKAAPSVTETFNFWKSLADACSVFSAVQSRAVDFPADVIMTLID
SGDKEAYDLFADVDNVGTGVISAKGLFSEDERLGVDLTRCIHATILCHKRAIHVSANDLH
AQAVAYYNLGWAEHRAHICLPSSIRKKSSVYLKTAMKCFKRAIELEAGNPDFWNSLGVVT
SEVNPAVSQHSFVRSLHLNERSPAAWTNLGTLALLQNDVQLANEAFNRAQSTDPDYAHAW
LGQGFVALLYGKVKEARGLFTHAMEIAEASSVLTRRQYSVAVFDFILGTTSANIASLIQP
IFGLGQLNSLKPQDLAYGHLSAMFLERTHDTGKAVETLEKICGILESDYEVTESPQSLAH
FALAKTDLARSYLAAGAFEQAIECGEMAIQLSADESDNELSREERKKARLSAHLTVGLAQ
YYSEDVNEALLCFESALEESDNNPDAVCLLAQVLWATGAEESREKARVALFEVIEKQPDH
VQSVLLLGVIAILDNDEESVEAVVSELQGLRTSHNVGDAEQSQIGEVLNAIAKLGDSSTE
EDVMTQIQTDIMLYPHLPHGWSNLAEFSGEQHAAAMALTVAKKAAPPRGTLEAESLAKAY
AGTGVAADAQTAIFLAPWKPDGWNSLREAVYGS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggccaatgctgtgctgaaggccattggcgactccgtgaagcagcaaaaatgg
gatgatgctattcagaaggcgactgactttcttgagcgggagccaaagaactaccaagcg
accatcttcctcgcttttgccctcgacaagaagagccgtgtcgatgacgcggagaaggct
tacaagtctgcggcttccctacgaccaaaggacagccaggcatggcaaggtctcatcaag
ctctacgagaagcaagaccgcaaacgcttagccgcctaccagcaggctgccatcagcttg
gctgagatttaccgtgatgcagaagacatgtacaagtgtcaagatgtcattgataagttc
attgactttgcaagatctcaaggggatacttcgcaatacatcgaagctctcagtgtcatc
ttgcccgggagtccgatttaccctgctctcgagggtcgcgttccacacccagccaaaacc
tacgagaccatggcgcagatgattgagacagacgagaagaagcgcataaatacactcatt
ggcgaacgacggacaaggatcggcgcgcgcctgactgaggtcactctcgaggtcaagcgt
gaagtcatagctcagagcaagctcgagttcgtctaccaccagctgatcaactggacgaac
gatgacgatctccggcggaaatatgaagaaaagcttctccagtactgctacgaccggctc
ctggtcgcaccacacggcccggaaaagggtcaggctcttcaagctgtcctgaaactggcg
cttgacatggtcatcatcaagcaccccttccggcttgcctgggagattgccattgactac
aaggacgccaaagagatcaaggaatgggacgtcaatatgctgagagactattgcacgttc
ttccccgagaccgatctctacaaagtcattaccggctttcttacgagtagcatctctccc
ttccctaagccaacaccggcggctctcgaagcggaggaaaccgaggaggagagcgaggac
gacgagggaggcggcgtttccatggtgcctctcacagaacaggatagaatccttatgatg
actgagggcatcactacgtcgaactcactattcgctcaccgattgatgggagagtactac
cagcatttagaggaatacgaaacgacggttgaactgatgcgaaagtcgatgggacacatc
aaaacggagagaaacaagaccggcatgtcgttccagaatacccacgatgccttctctttg
tacttggcaacagggttggtgttcttccagtcaccgagacatcacactgaggccaagtcg
ctgtttgaaggggttctatcacatgatccgtcgtctactccagccttgattggtgtcggt
ctcatctacgaagaggaggaggattacgacgacgccatagatttctttgggcgtgctctg
gagagagacccctccaacctacgggtcaagaccgaatctgcctgggtccaggcgctcaaa
ggagactttgagactgcaaaggcagagctggaggattcgctgcctctcatcgaggagatg
cctacgccttcgaaggagcttctcgcgcagacacagtatcgactaggttcatgcatctgg
aacattgacacatcaaaggcagcacgcaaaagccgcaccggcgcttacttgtacttcttg
gacgccctaaagaacaatctcaactttgcgccagcctacacgagtctcggtgtctactac
gccgactacgccaaagacaagaagagagccagacgctgcttccaaaaggctgtagagctc
tctgcctccgaggtcgaagccgccaagcgtcttgctgagtcttttgctgacgagggcgac
tgggacagagtcgagcttgtggcgcagcgtgtggttgactctggaaaggtcaagccgccc
ccgggctcgaagaggaagggcatcagctggcccttctctgcccttggcgtggcagagctg
aacaagcaggatttccacaagtctatcgtgtctttccagtctgcactgagaatccaccca
gaggactaccactcgtgggtcggcctgggcgaaagctactactcttccggccgatacatc
gcagccaccaaggcgattctcaacgcccagaagctggaggagactgcgcctgccgagact
ctgggcgacacttggttcaccaagtacatgcttgctaatgtcaagcgtgagctagctgaa
ttcgatgaggccgtcgctctgtaccaggatgtcattgagggccgccctgatgaggacgga
gttgccattgccctaatacagaccatggttgacagtgctctcgacagtgtggaaaagggc
ctgtttggcaaggcggtgcacctcgccatcgacacgatagactttgcatcaaaggccgct
cctagcgtcaccgagaccttcaacttctggaagtcgctcgcggatgcttgctccgtcttt
tccgcggtacaaagccgagcggttgacttcccagcagatgtaatcatgacactaatcgac
agtggcgacaaggaggcatatgacctctttgccgacgtggataacgtcggaaccggtgtc
atatctgcaaagggcttgttctctgaagatgagagacttggtgttgatctgacaagatgc
atccacgcaaccattttgtgtcataagcgggcaatccacgtctctgcaaacgacttgcat
gcccaagcagtcgcatattacaaccttggctgggccgagcaccgggctcacatttgcctg
ccctcgagcatcagaaagaagtcgagcgtctacttgaagacggccatgaagtgcttcaag
cgagccattgaactggaagccggtaacccggacttctggaactctttgggtgtcgtcacg
agcgaggtcaacccggccgtctcgcagcactcgttcgttcgcagcttacacctgaacgag
agaagcccggcagcctggaccaacctcggcaccctcgcccttctccagaacgacgtgcag
ctcgcgaacgaagcctttaaccgggcgcagtcaactgatcccgactacgcgcacgcgtgg
ctcggccagggttttgtggcactcttgtacggaaaggtcaaggaggccaggggcctgttc
acgcacgccatggagatcgccgaggcatcgtcggtgctcaccagacgccagtactcggtg
gccgtgttcgacttcatcctgggcacgacgtctgccaacatcgcctccctgattcagccc
atcttcggcctcggccagctcaacagcctgaagccacaggacctcgcgtacggacacctg
tcggccatgttcctggagcggacccatgatacgggaaaggcggtggagacgctggagaag
atctgcggcattctcgagtccgactacgaggtcactgagtccccgcagtccctcgcgcat
ttcgcgctggccaagaccgacctggcgaggtcctaccttgccgcaggcgcgttcgagcag
gctatcgagtgcggcgagatggccatccagctgagcgccgacgagtccgacaacgagctg
agcagggaagagcgcaagaaggcgcgactttcggcgcacttgaccgtcgggctggcgcag
tactacagcgaggatgttaacgaggcgctcctgtgcttcgagtcggcgctcgaggagtcc
gacaacaaccccgatgcggtctgtctcctcgcgcaggtgctctgggccacgggcgccgaa
gagtcccgcgaaaaggctcgtgtcgcgctattcgaggtcattgagaaacagcccgaccac
gtccagtccgtcctcctgctcggcgtcatcgccatcctggacaacgacgaggagtcggtc
gaggccgtcgtgtcggagctgcaggggctgcggacgagccacaacgtcggagacgcggag
cagtcgcagatcggcgaggttctcaacgctatcgcgaagctcggggattcgagcacggag
gaagatgtcatgacgcagatccagacggatatcatgctctatcctcacctgcctcacggc
tggtcgaacctggccgagtttagcggggagcaacatgcggcggcgatggcgttgactgtg
gctaagaaggcagcgccgcctaggggtacgcttgaggcggagagtttggcaaaggcgtat
gctgggacgggagtcgcggcagatgcgcagacggccatcttcttggctccttggaagcct
gatggttggaactctttgcgagaggctgtttacggcagctag
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