Colletotrichum lupini: CLUP02_07709
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Entry
CLUP02_07709 CDS
T08561
Name
(RefSeq) SNF2 family domain-containing protein
KO
K15083
DNA repair protein RAD16
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_07709
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
CLUP02_07709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
AAA_34
DEAD
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
73341712
NCBI-ProteinID:
XP_049143845
UniProt:
A0A9Q8WGR9
LinkDB
All DBs
Position
4:complement(join(1906287..1906557,1906608..1906742,1906857..1907069,1907125..1909972,1910072..1910183,1910241..1910343,1910392..1910459,1910601..1910668,1910732..1910813,1910881..1910922))
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AA seq
1313 aa
AA seq
DB search
MGCSLSNRSQSRGANIHVRTSDPSQANQKNFPFPDWLQALGKPAIEGRVPDLPRSPPSPS
LLSETVWPLPQGNLQFQFVLFPSLTKSFFGDKLRLFATTCRALSRPSQLSSHVNRRQTFT
SCKKSSSLHPKVIIAVKMTGRRGRPSLAQKESMASTRSNSPDPLSVAGTGRLTRSASSRN
LAAAAQPVTSATSTAKRGRGRPSRASLANDSASSTASASAAASADLTSASEASTPATSNV
ATPAPSVSGSGYVPLVLPAALRNPRIEGSQSASKIEVHLPTSAGLNERALRHSQYSMQPA
KRKVGGGYYDDDDEEDEEPSDNDRDALVARRLQKEENKKSTASTSLSDAALARHLQEEEY
EMDESDVPLATGRSRRATAIAAKATVKDSDADSEDVPLVSRSKLGGRGRGRPPKKQKVVV
PESDNEDGFADSTDDELSDLSDNFSELEDDDSNKIPKKAKAKGKAKQPVRRTRASASTLP
PASEGLPEDDDDALSSLDSGDFDSSESDEADSDGGLQSAVAAQSRGRRAYQRGSKRRGML
ERARLENNHPELLTMWQDLEASPALRPDKIAQPLQISRQLKPFQLEGVSWMIEMEKTDYK
GGLLGDEMGLGKTIQAVSLIMSDYPQKKPSLVLVPPVALMQWKSEIESYTDGTLKVFVYH
GTMKNAKNMTLKELKKYNVIMMSYNSLESMYRKQEKGFTRADGVHKEKSLIHQVDFHRII
LDEAHSIKTRTTMTAKACFALKTSYRWCLTGTPLQNRIGEFFSLIRFLQVAPFASYLCKQ
CPCAGLDWNLDDDHRCHSCGHAGMQHVSVFNQELLNPIQKFGNFGPGREAFQKLRLMTDR
IMLRRLKKDHTNSMELPVKEIYVDRQFFGEAENDFANSIMTNGQRKFETYVAQGVLLNNY
ANIFGLIMQMRQVADHPDLILRKHGEGGQNTLMCGVCDEPAEDAIRSRCKHDFCRACARS
YLLSSAEPDCPRCHIALAIDLEQPEIEQNEADVKKSSIINRIKMEEWTSSSKIELLVHEL
HKLRSDNASHKSIIFSQFSSMLQLIEWRLRRAGITTVMLDGSMSPAQRQASIDHFMTKTE
CECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIED
SVESRMVLIQEKKTNMINSTVNADDKAMESLSPEDMQFLADGKDKDIGTVVPSPHHRSRA
CVVLFFLHPFSICKYGVVHGWNTFWVVLCFSVWTIDSEIRYQQILIAMLVTMRSHIVPYN
QLAGQQCQHPWAHDPQTPHVGAGLRRGLVYQGTEYWKSRKDTPNGYSIPTGFR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtagcctttcaaatcgcagccagtccaggggagctaacattcatgttcgcacc
agtgaccccagccaggctaaccaaaaaaacttcccatttccagactggcttcaggcttta
ggcaagcccgccattgaagggcgcgtccctgatctccccaggtcccctccttccccgtct
ctcttgtctgagactgtgtggcctctacctcagggcaatctacaatttcaattcgtcctt
ttcccctccctcaccaaaagcttcttcggcgataagctgagactgttcgccaccacttgc
cgagctttgtcccggccatcccaactttcttctcacgtcaaccgtcgccaaactttcacc
tcttgcaaaaaatcctcctcgctgcacccaaaggttatcatcgccgtcaagatgactggc
cgccgtggtcgcccttctcttgctcagaaggagagtatggcctccactcgaagcaactcc
cctgaccctctctcggttgctggtaccggccgtctcactagatctgcatcgagccgtaac
cttgcagctgcggctcaacctgtgacttcggctacttcgactgccaagagaggtcgaggt
cgacccagcagagcctccctggccaatgactctgcttcctcaactgcatctgcgtctgct
gctgcatctgccgacctcacttctgccagtgaagcctccacccctgctaccagcaatgtt
gctacacctgctccctccgtctctgggtctggctatgtccctcttgtcctgcctgccgct
ttgagaaaccccaggattgaaggatctcagtctgcatccaagatcgaggttcatcttccc
acttctgctggactcaacgagcgtgctctgcgtcacagccagtattccatgcagccagcc
aagcgcaaggttggcggtggttactacgacgacgatgatgaagaggatgaggagccatct
gataacgaccgcgatgctctggttgctcgccgcctccagaaggaagagaacaagaaatcg
actgcctccaccagcctgtccgatgccgccctcgctcgacatctccaggaagaggagtac
gagatggatgagtctgatgtcccccttgccactggtcgcagccgtcgtgcgactgctatc
gctgctaaggccacggtaaaggacagcgacgccgactccgaagacgttccgcttgtttct
cgatccaagcttggtggtcggggccgaggtagaccccccaagaagcaaaaggttgtggtc
cctgagtcggataacgaggatggattcgcagattcgacggacgacgagctcagcgatctc
tcggacaacttttctgaacttgaggatgatgatagcaacaagattcccaagaaagcaaag
gcaaagggcaaggctaagcagccagtcagacggactagagcttccgcttcgacactgcct
ccagcctctgaggggctccctgaagacgatgacgatgctttgtcgagcctcgatagcggc
gactttgacagctcggaatctgacgaggccgatagtgacggcggtcttcagagcgccgtg
gccgcacagtcccggggtcgccgcgcctatcaacgcggctccaagcgccgcggcatgctt
gaacgcgccaggttggagaacaaccatcctgagcttctcaccatgtggcaggacttggag
gcgtctcccgccctcaggcccgacaagattgctcagccgctgcagatctcgcgtcagctc
aagcccttccagctcgagggcgtctcttggatgattgagatggaaaagaccgactacaaa
ggcggcctgttgggtgacgagatgggtctcggcaagaccatccaggcggtatccctcatc
atgtccgactacccccagaagaagccctccctcgtcttggtccctcccgttgctctgatg
cagtggaagagcgagattgaatcctacacggacggcaccctcaaggtctttgtctaccac
ggtactatgaagaacgccaagaacatgaccctgaaggagctcaagaagtacaatgtcatc
atgatgtcgtacaatagtctggagtccatgtaccggaagcaggagaaaggctttacccgc
gcagacggcgtacacaaggagaagagcttgatccaccaggttgacttccaccgcatcatc
ctcgacgaggcccatagcatcaagacccgtactaccatgacggcgaaggcttgctttgct
ctgaagacctcgtaccgatggtgccttaccggaactccgcttcagaaccgcattggcgag
ttcttctccttgatccgcttccttcaagttgcgcctttcgcatcgtacttgtgcaagcag
tgcccctgtgccggcctggattggaacctcgacgacgatcaccgttgccactcgtgcgga
cacgccggcatgcagcacgtgtccgtattcaaccaggagctcctcaaccccattcagaag
tttggcaactttggaccgggccgcgaagcctttcagaagctccgcttgatgaccgatcgc
attatgcttcgtcgcctaaagaaggaccacaccaactccatggaactccccgtcaaggag
atctacgttgatcgccagttctttggtgaggcggagaatgatttcgccaacagcatcatg
accaacggccagcgcaagttcgagacgtacgtcgcccagggtgtcttgctcaacaactac
gccaacatttttggtctcatcatgcagatgcgccaggtggccgatcaccccgatctgatc
cttcgcaagcatggagagggcgggcagaacacactcatgtgtggcgtttgcgatgagccg
gccgaggatgccatcaggagccgctgcaagcacgacttttgccgcgcgtgtgctagaagc
tacctgttgtcttctgctgagcctgactgcccccgctgccacattgcgctggccatcgac
ttggagcagcccgagattgagcagaatgaggctgatgtcaagaagtcttcgattatcaat
cgaatcaagatggaagaatggacttcttcctccaagattgagcttctcgtccacgagctt
cacaagctccgatcagacaatgcttcgcacaagtcaattatcttttcacagttctcatcc
atgctgcagctcatcgagtggcgtcttcgccgcgccggtatcaccaccgtcatgcttgac
ggcagcatgagccccgcgcagcgccaggcgtccatcgaccacttcatgaccaagacggag
tgcgagtgcttcctcgtctctctcaaggccggtggagtcgcgctcaacctcaccgaggcg
tctcgcgtcttcatcgttgacccttggtggaaccctgccgccgagtggcagtctgccgat
cgttgccaccgcattggtcaaacccgcccctgcaccattacccgtctctgcatcgaggac
tcggtcgagagccgcatggtgctgattcaggagaagaagaccaacatgatcaactccacc
gtcaacgcggacgacaaggccatggagtctctgagccccgaggatatgcaattcctggca
gacggaaaggacaaggacattgggactgtagtacccagcccccatcatcggagtcgggcg
tgcgtcgttctcttcttcctacaccccttttcgatttgcaaatatggcgtggttcacgga
tggaacaccttctgggtggttctttgtttctccgtctggacaatagattcagaaattagg
tatcagcaaatattgatcgcaatgctagtgactatgaggagccatatagtgccgtataat
caactggccggtcagcaatgtcagcacccatgggcccacgatccgcaaactccgcacgtg
ggcgctgggttacgtaggggccttgtgtaccagggtacggagtattggaaatcccggaaa
gatactcccaatggttattcaatccccacaggcttcaggtga
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