Colletotrichum lupini: CLUP02_12916
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Entry
CLUP02_12916 CDS
T08561
Name
(RefSeq) Sec23/Sec24 trunk domain-containing protein
KO
K14007
protein transport protein SEC24
Organism
clup
Colletotrichum lupini
Pathway
clup04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CLUP02_12916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_12916
Membrane trafficking [BR:
clup04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CLUP02_12916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DEK_C
Motif
Other DBs
NCBI-GeneID:
73346884
NCBI-ProteinID:
XP_049149020
LinkDB
All DBs
Position
6:join(4873144..4873185,4873921..4875321,4875374..4875471,4875525..4877055,4877118..4877204)
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AA seq
1052 aa
AA seq
DB search
MSDNNLVVVAVASAQSTTSFPSRNPPTHRPPPISANMSDFSMYHQLGQGEQDPSNPNRST
QPAPPQFSPPVAGQQYQQGTPYGAPAPPGQQYYGGQPDSAPPQAQPYGAPPGQEYAQNPG
FQSQENLAAQMGGMSLGDGHGTARRKKKDRHAYHQVEATGSSQPFNGIPAAGTNATAFLN
DPSQAQYAQMNQFPVAAGQTFTPANPASPAEFATRNGTDAGGPPAVVQTSGHQKLSLDDL
PSVPVSRDSLQQHYFSNVYPTFEKHLPPPSTVSYVAYDQGNASPKFARLTLNSIPSNAEG
LALTGLPMGLLLQPMAPLQPGELEIPVLDFGDSGPPRCRRCRAYVNPFMMFRSGGNKFVC
NLCTYPNDTPSEYFSALTPQGVRVDRDQRPELTRGTVEFVVPKEYWTKEPTGLRWLFVID
VTQESFNKGFIESFCEGIVAALYGGEDAERDDNGEPKKSIPPGAKVGFVTYDKDIHFYNV
NPALDQAQMMIMPDLEDPFVPLSDGLFVDPYESKDVITSLLTMLPTMFSNIKNPEPALLA
TLNSAVAALEKTGGKIVCSLAALPTWGPGRLFLRDDGKHPGGEIDKKLFSTEHPAWKKVA
EKMVATGIGADFFLASPSGGYLDIATVGHVAASTGGETFYYPNFIGARDNTKLSMEIKHA
VTRETGFQALMKVRCSNGLQINGYHGNFIHHTFGADLEIGVIDADKAMGVTFSYDGKLDS
KLDAHFQSALLYTTASGQRRVRCSNIIASVCDNPRDSVKFIDQDAVFTILAKEASTKLAS
TSATLKDVRNHLTERTIDILSAYRKNFLTSAQPDGQLVMPERLKEFSMYMLGLLKCRAFK
GGNESSDRRVHEMRMIRSMGAKELSLYLYPRMIPIHNLTPEEGFPDESGHLKVPPAIRTS
FSRVEPGGVYLVDNGQQCLLWLHSQTSPNLIADLFGEDKTTLQSLDAYTSSLPMLQTHLN
AQVRNIVEFLKTMRGSKGLGIQLARQGIDGAEYEFARMLVEDRNNEAQSYVDWLVHLHRS
VQLELSGQRKREDPLTDANALAGFAGLRPNYW
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataataatctcgttgtcgtcgctgttgcaagcgcacaatcgaccacgagcttc
ccatcacgcaaccctccaacacaccgaccaccgcccatttccgcaaacatgtctgacttt
agcatgtaccaccagctgggccagggcgaacaagacccttcgaaccccaatcgatcgacg
cagcccgcacctccccagttctcccctcccgtcgcggggcagcaataccagcagggaact
ccatacggcgcccctgcacctccaggacagcaatactatggaggccagcctgattccgca
ccacctcaggcacagccgtatggggcccctccaggtcaggagtatgcgcagaatcctggt
ttccagtctcaggaaaacttggcggcgcaaatgggaggcatgtcactaggtgatggacac
ggtacagcaaggaggaagaagaaggaccgccacgcataccaccaggtcgaggcgacaggc
tcgtcgcaacccttcaacggaattcctgctgccggcacgaatgccacggccttcctcaac
gacccttcgcaagctcagtatgctcaaatgaaccagtttcccgtcgccgcgggccagacc
tttacacccgccaatcccgcttccccggctgaatttgcgacccgaaacggcaccgatgct
ggcggacccccggctgtagttcagacttccggacaccagaagctgtctctcgacgacctg
cctagtgtgccagtctcccgtgactctcttcaacaacactacttctccaatgtttatccc
acctttgagaagcacctgccacctccctcgactgtctcatatgttgcctacgaccagggc
aatgcttcgcccaagttcgcgcgcttgacactgaacagcattccgtccaatgccgagggc
ctcgcacttactggtctgccaatgggtcttctccttcagcccatggcacctctccagccc
ggggagctcgagattccagtccttgattttggcgattctggccccccgagatgccgtcgc
tgcagagcttacgtcaaccccttcatgatgttccggtccggcggcaataagtttgtttgc
aacttgtgcacttaccccaacgataccccgtccgaatacttctccgcactcactccccaa
ggtgtaagggtggaccgcgatcagcgcccagagcttaccaggggtactgtggagtttgta
gtgcctaaggagtactggacgaaggagcctactggtctgcgctggctgttcgtcattgat
gttacccaggagtccttcaacaagggattcatcgagtccttctgcgagggcatcgttgct
gccttgtacggtggcgaagacgcagaacgggatgacaatggcgagccaaagaagagcatt
ccccctggcgccaaggttggcttcgtgacttatgacaaggacatccacttctacaacgtc
aatcccgccctggatcaagcccagatgatgattatgcccgatcttgaggatcccttcgtg
cccctgagtgacggtctctttgtcgacccttacgaatctaaggatgtcatcacatctctg
ctgactatgctgcccaccatgttctcaaacattaagaaccccgaaccggccctcctggcg
accctcaactctgctgttgccgcattggaaaagaccggaggcaagatcgtctgttctctg
gcggctctgcctacctggggccctggccgtctcttcctccgtgacgatggaaagcatccc
ggtggagagatcgacaagaagctcttctctacagaacacccggcatggaagaaggtggcc
gagaagatggtggccaccggtatcggtgccgacttcttcctcgcgtcgccttctggcgga
taccttgacatcgccacagtcggtcacgttgcagcctctaccggtggagagacgttctac
taccccaacttcatcggggcccgtgacaacacgaagctgtccatggaaatcaagcacgcg
gttacgcgcgagactggcttccaggctttgatgaaggttcgttgctcgaacggcctgcag
attaacgggtaccacggcaacttcatccaccacacttttggtgccgacctggagattggt
gtcattgatgctgacaaggctatgggcgttaccttctcttatgacggcaagctcgactcg
aaacttgacgcccacttccagtcggcgctgctgtacaccacggcttccggccagcggaga
gtgcgctgctcaaacattattgcgagtgtgtgcgacaaccccagggatagcgtcaagttc
atcgaccaagatgccgtgttcacgattttggccaaggaggcaagcacaaaactagcaagt
acttcggcaacgctgaaggatgtccgcaaccacctgacggagcgtacgatcgacattctc
tcagcgtaccgtaagaacttcttgacttcagcgcaaccagacggccagctggtcatgccg
gaaaggctcaaggagttctccatgtacatgctcggtctcctcaagtgccgcgccttcaag
ggtggtaacgagagttccgaccgtagagtccacgagatgaggatgatccgttccatgggc
gccaaggagcttagcttatacctgtatccgcgcatgatccccattcacaacctcactcca
gaggagggcttccctgacgagtccggccatctcaaggtaccgcctgcgattcgcacgtcc
ttctctcgcgtggaacctggcggcgtctatctcgtcgacaacggccagcagtgtctcctg
tggctccactcccagacctcaccgaacctcattgccgatctctttggcgaagacaagaca
accctccagagcctcgacgcgtatacttcatcgctccccatgctccagacacatttgaac
gcgcaagtacggaatatcgtcgagttcctgaagacgatgcggggttccaagggtctgggt
atccagcttgcgagacaaggaattgatggtgccgagtacgagtttgcgcgcatgctcgtc
gaggacaggaacaacgaggcacagagctatgtcgactggctcgtccatcttcacaggagt
gtccagctcgagctttctggccaaagaaagagagaggacccgctgacggacgccaacgca
ctagcaggcttcgccggtctgaggcccaactactggtaa
DBGET
integrated database retrieval system
