Clavispora lusitaniae CBS 6936: A9F13_09g00825
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Entry
A9F13_09g00825 CDS
T05147
Name
(GenBank) putative sKI complex subunit tetratricopeptide repeat protein
KO
K12600
superkiller protein 3
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9F13_09g00825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_09g00825
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
A9F13_09g00825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_22
TPR_14
TPR_1
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_11
ANAPC3
TPR_9
TPR_6
ARM_TT21_N
T7SS_EccA1_N
Fis1_TPR_C
ARM_TT21
HAT_Syf1_CNRKL1_C
DUF5838
HAT_Syf1_M
Motif
Other DBs
NCBI-ProteinID:
OVF08157
UniProt:
A0AA91PZR0
LinkDB
All DBs
AA seq
1386 aa
AA seq
DB search
MSMKQLKAAKKALEGDDPELALEHVDEVLSEEPNNYYAHIFRGKSYQLLNKLDKASASFA
EATSIEPDTLLGWKGYFQVVRSQDDYAQFFQVLTSYLKVLIHQGIGIGDVIKEVYNYLNA
HKYHSDAELSEMFLSSILPGTELGDLLDGAMGKPEEILQQLITLVRDKEAQELRTKLAKE
KLRLPRVLNPQHKAHLNEIEWSIRQQYNLSELYKKFLHFSNDDELRRKYEQEFLKYRYEL
LRVVPEKKTLLQEIKEMCSDMVVIDTNDMFAWSLYFDLQDPKSLADLDEGIVFRFIRKFQ
KEGLGVLLLAFVMSDMCPFDKARIAAFKAEINEAKFKNPSFKEGDGELKNLEEDEAVTEN
SLTPSEILDMMVEGYSKCSNSTLADRVICNFYIHLNEYEAGSSKCTTAIHHLAELQRTYG
IDLANAKQDILCSLATVYTYYEAPKNFSRALQLYDRILKDSPNNKQALIGKGLILLEKRD
LESAKEILSQVAKSYPKDVRALKELGWCHILMKNFNEGREMLEKALVYIEGASVHQMEMR
ATIRARIAKSYLLEGSPSEENLKIAFDNLIQSLKDHPTYAPSYTLLGTLYKEYYHNEARA
QKCFYKAFELDVSEIEAAKYLASDFAEKQEWDITEVICQRVVTSEKSRRILFSQLYDDSD
KSWPYRVLGCSALNKQDDAKAIEWFQTALRMKAMDPECWTGLGEAYYNCGRIDAAIKVFK
HTTTIVPDSWTNFYMLGLSVCAIGDFSDGLALLKKALAMSPDEECILNAIYEQSINHSAQ
LLQGGFTKRMLETNIETIETISRAVKINSTSQNLWKSLCDCLNLATSVQQEIQKFPIATV
ISIVNQVPNIDDDMISSKRALDLFENNMWVNAICSLAILSARAAIAVLPKKVNKLLRASC
QFNLGRAFLVNAQHDSERKEQCQEAAIIAIKSAIQLEPGNAQYWIALANAYTSTKPQIAQ
HCFIKASTLDARDVSVWTNLAAFYLRYGDVELAREAFDKATSLAPDQATSWLGNALAADL
SNDMETASRLTTHAYILSKGRSPLSQLYYAVSIVNKRVGHAKDVRDVEAAQEFSIANFAI
QNFLKFHPDDVEGLKLCLLLSERCQTYKISVEVGETLCRLLEEKYERTEDIDTLIEFAEA
KTSLARVYLGMEDYEKAVDCAQFTMDCLAEEELTKEITQSLLSSRIVIGLAFFFNGQFKE
ALEEFQIILAEHNSSQRVVTLIAQVLHARNTTETKQAALDELFAFIEEYGSSLIVVLTLG
AISIVDNLEEYFTPIKEELESLKPTDLVDDTSRLVPTMLQELSFKTNNDTRVWQKFAMLF
PGDFNIWKNLDASMALSTAMLTDTKCTAREVSDAYLQKGTRREVQRALLICGDNHEAHAA
LLSKYN
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaagcaattgaaagccgctaagaaggctctagaaggcgatgatcctgaacta
gcattagagcatgtggatgaggtgctactggaagaaccaaataattactatgctcatatt
tttcgtggcaagtcatatcaacttctaaacaagttggacaaggctagcgcgtcgttcgcc
gaggcgacatcgatcgagccagacactttgttaggatggaaaggttattttcaggttgtg
agatcacaagatgactacgcacagttctttcaagtgctaactagttatttgaaagtattg
attcaccagggtattggaattggcgatgtgattaaagaagtgtacaattacttgaatgcc
cacaagtatcacagtgatgcggagctaagtgagatgtttcttctgtctattcttccagga
acggaattaggagatttgcttgatggtgccatgggtaagcctgaagaaatattacagcag
ctaattacattggtgagggataaggaagctcaagagttgagaactaaattagcaaaagaa
aaacttcgcttgcctcgtgttctcaacccacaacataaagcccatttgaatgagatcgaa
tggtctatcagacaacaatacaacctttcggaattgtacaagaaatttttgcacttctcc
aatgacgacgagctcagaaggaagtatgagcaagagtttttgaagtacagatacgaattg
ttgcgagtggttcccgagaagaaaactcttttgcaagagataaaggaaatgtgtagcgat
atggtcgttattgacacgaatgacatgttcgcctggtctctctactttgatttacaagac
cccaaaagcctagcggacttggatgagggaattgttttcagatttattcgcaaattccag
aaggaaggattgggtgttttacttttggcttttgtaatgagcgacatgtgtccctttgat
aaagcacgaattgcagccttcaaggctgaaatcaatgaagcgaaatttaaaaatccgagt
ttcaaggaaggggatggtgaattgaagaatcttgaggaggatgaagccgtaactgaaaac
tcgctcacccctagtgaaattcttgatatgatggtggaaggttactccaaatgttctaat
tcaactttggctgatcgtgtaatttgcaacttttacatccacttgaacgagtatgaagct
ggctcctcaaaatgcactacagctatacaccacctcgctgaactacagagaacttatggt
attgaccttgcaaatgctaagcaggacatcttgtgcctgcttgcaacagtctatacgtac
tatgaggctccgaaaaacttttctcgagcacttcaattatatgatcgtattctcaaagac
agcccaaacaataagcaggctctcattggaaaagggttgattttgcttgaaaaaagagat
ttggaactggctaaagagatactctctcaggtcgctaagtcgtatcccaaggacgttaga
gctctcaaggaattaggctggtgtcatattttgatgaagaatttcaacgaaggtagagag
atgttggagaaagctttggtttatattgaaggcgcgtcagtgcatcaaatggaaatgcgt
gcaacaattcgtgccaggattgccaaaagttatttacttgagggatctccatctgaggaa
aacttgaagattgccttcgataaccttatccaatcactcaaggaccatccaacatatgcc
ccatcttatacgttattggggactttgtataaggaatattaccataacgaagctagagca
caaaagtgcttttacaaggcttttgaacttgacgtttcagaaattgaggctgccaagtat
cttgcttctgatttcgcagaaaagcaagaatgggatatcactgaggttatttgtcaaaga
gtcgttacatcagagaaaagtagaagaattctattcagtcagttgtacgacgattcagat
aagtcctggccataccgtgtcttgggatgttctgccttaaacaagcaagatgacgcaaaa
gctatagaatggtttcaaaccgctcttagaatgaaagcaatggatccagaatgttggaca
ggtttaggtgaagcttattacaactgcggtcggatcgatgctgccattaaggtattcaag
cacactacaacaatagtacctgattcctggacaaatttctacatgctaggtttatctgtt
tgtgcgattggagatttctctgacggtttagccctccttaaaaaagcgttagcaatgtct
cccgatgaagaatgtatcttaaatgctatctatgagcaatcgattaatcatagcgcccag
ttattacaaggaggattcacaaagcgaatgcttgaaacaaatattgagaccattgaaact
atttcgcgagctgttaaaataaacagcacttctcaaaacttgtggaagtctctatgcgac
tgtttaaatttggccacgagtgttcaacaagagatccaaaagtttcctatagcaactgtt
atactgattgtgaaccaggtccccaatattgatgatgatatgatatcaagcaaacgtgca
ctcgatctctttgaaaataatatgtgggtaaatgcgatatgctcgctcgctatcctttct
gccagagcagccatagcagtcttaccaaagaaggttaacaagttgttaagggcttcctgt
caattcaatttaggccgtgcatttttggtgaacgctcaacatgattcggaacggaaagaa
cagtgtcaagaagcagctattattgccataaagagtgctattcagcttgaaccaggcaat
gcgcaatactggattgcgttagcaaatgcttatacatcaacgaagccacagatagcacaa
cattgtttcattaaggcgagtacattggatgctagggacgttagcgtgtggaccaatttg
gctgcgttttacttaaggtatggagatgtggagttagctagggaagcttttgacaaggca
acctctttagctccagatcaggctacctcttggttgggaaatgctttagcagcagactta
tctaatgatatggaaactgcatctcgattgacaacgcatgcatacattctttccaagggc
aggtctccattgtctcagttatattacgcagtaagcattgtgaacaaacgagttggccat
gctaaagatgttcgagacgttgaagcggcccaagagtttagtatagctaattttgccatt
caaaatttcttgaaatttcatccagatgatgtggaaggtttgaaactatgtcttcttttg
agtgagcgatgccaaacttataagataagtgttgaggttggcgaaaccctttgccgcttg
ctagaagaaaaatacgagcggactgaagacatcgatacgcttatcgaattcgcagaagcg
aaaactctgttggctagagtatacttgggtatggaggattatgaaaaggctgttgattgt
gcgcaatttactatggattgccttgcagaagaagagctcacgaaggaaatcactcaatcc
ttactttcctcgaggattgttattgggttggctttcttcttcaatggtcaatttaaagaa
gctttggaagaatttcagataattcttgccgaacataatctgtcacaaagagtcgtgact
ttgattgcgcaagttttgcatgctcgcaacacaacggaaaccaagcaggcggctttggac
gagcttttcgcattcatagaagagtacggttcttcgttgattgttgtacttaccttagga
gcaatttccattgtggacaatttggaagagtactttacacccatcaaagaagagcttgaa
tctcttaagccgaccgatcttgttgacgacacgtctcgcctagtacctacgatgttacag
gaactctccttcaagaccaacaatgatacaagagtgtggcagaaatttgcgatgttgttc
cctggagattttaatatctggaagaatcttgatgcatctatggcgttgtcaactgcaatg
ttgaccgatacgaaatgtactgctcgtgaagtttcagatgcttatttgcaaaaggggact
agaagagaagtgcaaagggctcttcttatatgtggcgataaccacgaagcgcatgctgca
cttttgagtaaatacaactaa
DBGET
integrated database retrieval system
