Columba livia (rock pigeon): 102083727 Help Entry 102083727         CDS       T02912                                  Symbol POLQ Name (RefSeq) DNA polymerase theta isoform X1   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism clv  Columba livia (rock pigeon) Brite KEGG Orthology (KO) [BR:clv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:clv03400]     102083727 (POLQ) Enzymes [BR:clv01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      102083727 (POLQ) DNA repair and recombination proteins [BR:clv03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     102083727 (POLQ) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc Motif Other DBs NCBI-GeneID:  102083727 NCBI-ProteinID:  XP_021143497 LinkDB All DBs Position Unknown AA seq 2572 aa AA seqDB search MEGSSCPVHCLVEEGQYQRVNVPEDQADKLLLANWGLPRAVLEKYHSLGVVQMFEWQAEC LMLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETRKKALLILPFVSVAKEKKCYLQA LFQEVDVRVEGYMGSMVPTGRFSALDVAVCTIEKANGLINRLIEENKMDSLGVVVVDELH MLGDSHRGYLLELLLTKVRYVTEKVAKRQAKMTSPSFGGIQIIGMSATLPNLGLLASWLD AELYCTDFRPVPLKEWVKIGSNIYDSSMNLVREFQPKLQLKGDEDHVVSLCYETVCEGHS VLLFCPSKNWCEKLADIIAREFYSLQQSEECFISQGSSKNSALAPVVVDREGIDEVLDQL KRSISGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSSGVNLPA RRVIIRTPMFCGKLLDMLTYKQMAGRAGRKGVDTEGESILVCKPSERSKGTTLLQGSLKP VCSCLLRREGEGVASSMKRAILEIIVGGVANTPDDVQTYASCTLLASSLKASKCGNERTQ DKAQTGPIEACVTWLLENEFIQVLDSGNDMKAAKVYHPTHLGSATLSSSLSPTEAMEIFA DLQRAMKSFVLENDLHIVYLVTPVYEEWTTIDWYQFFCLWEKLPASMRRVAELVGIEEGF LARSVKGKIIAKTEKQHRQMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRGQLQSLQQ SAATYAGMVTVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARMLYNA GFVTVADLAKASPDDVATALKNSVPFKSVRKAVDEDEESAEERRAVRSIWMAGMKGLTER EAASLIVEEARRLLQQDLALMGVQWNPESFLESDTSSMMSRESELEDRLHRSSESSRALS KKGCGVQHCNGLGSQTGNLSNIKKGYKRRLSSSTENSRFESEVPGGRQARSEEGNDDIVC SPRKRLNVCRNNENVEGISLVKTKMDSRRAILEPSTEQGKTPTLRTYFSASRLLKSMDMH LNRTRNKNTASKLQRSLLEDSNTLSVDIQKPPAFHPTISKENSFSDQNNKEFMVTGSVTR QISNSVQMGAVTLGKKDKMEGLFTESTSSNEGMPQGRPCFQAPVTLRGIPHTDVETRNIV ESLVIPANVRTQRNENRDDKQSKINKMRTDASCAEVMIGKQQMALDADCRNVTASCSGNE HVHSGSRVQKPVRFCPGEDKPCHIQIQNGGKNGSEESNGISLQAEALQKANSHPKDFLKN SLMKSRGVHDAGDVQDSPSSDLFSDFEDSFQLDTQTEMIIKQEGAAGITGQQGMQSSKLA VIPRQEICKKLSTSRTENATDERLAATVRKLGFSSLITTNNVTKNTAQHCSNNVLECGGL NLQPVTKEIDSAPYLKESDFSVTDSQLHSFLRDYHTQNAVKGETVSKDLDKATSPFGREH IVQIECHPVPETSLNMSDSLLFDDSFSNISDLAAVHITEADRKEPVEKQGVLVSPEHLLQ DLRPVQNKCDVSGNQKEHEDCAQGNNVSLAFSELIAEVLDHANSPSFLEGLPSTFDRQSG LRNPVMCNNDPRSKDLVADKGEKLQRSQKALDKKTHPVVWTDPSFELSPGLQDVLDKWHS PSGIEPVSVSSCLKEKLVAPITNQEPDPVFESDRCHLEPLPTCQDLKSYFKVKENKPEDS DFQKTDCIALPLKGSNRTSCPSPDSNNASIPPTPPKKVFPKSSVSLSVKSLRKRQVACMD EGQLIQPQQNSEGNAEQQVKTLQVSPGIVEQIEADEMKDDSTIDQGFSLQLSQDLSPLVP LSDESFTIIDVASDKALFQTFLAEWKEKSRFSISVACEKTRRLLSPKSTIGGKFKKASSP QWKQVKDDGFPVQGCEDILVVGLAVCWGGRDAYYISLQQIQDQTEISMSLAPPPLDKNLS VTERLYHLQLHLQKKPKQERSLIMYNFIQHYKTLVMACGISLEGNFEDPKVACWLLDSDS KERTLHNMVTNFLPNELPLLEGVGTGQGVQSLGLSASRDHSGRYRAAIESVLVFSVMNQL HNELQKENLADVFSKVEMPSHYCLALLELNGIGFSTTAYETQKQVMQAKLSEIETKAYQL AGHSFSLTSPDDIAEVLFLELKLPQNGDVKVQGNKKTLGYTRRSTAKGNRVRLSKQFSTT KDVLEKLKTLHPLPGLILEWRRINNAITKVVFPIQREKRLNSALGMERIYPVSQTHTATG RITFTEPNIQNVPRDFEIEMPIVVEESPPSRAHGNVNSRSVSGGRCRKRSIVLSHGLKVQ AEDRSKERGIPFAVSMRHAFVPFPGGLILAADYSQLELRILAHLSCDCRLIQALNGGTDV FKSIAAEWKMIDPEAVGDGTRQQAKQICYGIIYGIGTKSLGEQMGIDEDEAANYIESFKS RYTGIQKFLRETVRSCRRDGFVQTILGRRRYLPAIKDSNPYSKAHAERQAVNTTVQGSAA DIVKTATVNIQRRLEAFSSVIKSHGHLESSFQRDQTGTLGRKRNRGTLHPISGGFFILQL HDELLYEVAEDDVIQVAQIVKHEMENAIKLSVKLHVKVKIGPSWGDLQDLEL NT seq 7719 nt NT seq  +upstreamnt  +downstreamnt atggaagggtcttcctgccctgttcactgtttagttgaagaagggcagtatcagcgggta aatgttcctgaagaccaagcagacaagttgctccttgcaaactggggtcttcccagagca gttctggagaaataccacagcctgggagtagtacagatgtttgaatggcaagcagaatgc ctaatgcttggacaagttctggaagggaagaacctagtttactcagctcctaccagtgct ggaaagactcttgttgcagaattgctcattttgaagcgagtcctggagactcgtaagaaa gctcttctcatccttccctttgtctctgtggccaaggagaaaaaatgttatctgcaggcg ctgtttcaggaggtggatgtgagagttgaaggctacatgggaagcatggttcctactgga cgtttctctgccctggatgttgctgtctgcaccattgagaaagccaacggtctaatcaat aggctaatagaagagaataaaatggactcactgggagtggtggttgtggacgagttgcac atgctgggagactctcatcgaggatatctgctggaactcctcctgaccaaagttagatat gttacagagaaggttgcaaaacgacaggcaaagatgaccagtcccagttttggtgggata cagataattggcatgagtgctaccctccctaacttggggctcctagcctcatggttagat gcagagctatactgcacggattttcgccctgtgcccctcaaggagtgggtgaaaattggc agcaacatttatgactcctccatgaatttagtgcgagaattccagcccaagcttcagctg aagggagatgaagaccatgttgtgagcctgtgttatgagactgtttgtgaaggccattca gttctgcttttctgtccatccaagaactggtgtgagaagctagcagacatcattgccagg gaattctacagtttgcaacagtctgaggaatgttttatctctcaaggttcttcaaaaaac tcagcccttgccccagttgttgtggacagagaagggattgatgaggttctggatcagcta aagcgttctatctcaggcctggattctgtgctccaacgtactttgccatggggagtggca tttcatcatgcaggtcttacttttgatgaacgggacatcattgaaggagcctttcgccaa ggcttgattagagtcctagcagcaacctccacgctctcgtctggagtgaatttgcctgca cgccgagtaattatacgaactcccatgttttgtggcaaactgctggacatgctcacttac aagcagatggctggaagggctggcaggaaaggagtagacacagagggtgagagcatttta gtttgcaagccctcagaaagatcaaaaggaactactctacttcaaggatctctcaagcct gtttgcagttgtttgcttagaagagaaggtgaaggtgttgcttcaagcatgaaaagagca atacttgagatcatagtggggggagtggccaacaccccagatgatgtgcagacctacgct tcttgcactcttcttgcatccagcttgaaagcaagcaaatgcggaaacgagagaacacaa gacaaagcacagaccggacctatcgaggcttgtgtgacgtggctgctggaaaatgaattc attcaggttctggactctggcaatgatatgaaagcagcaaaggtttatcatccaacgcat cttggctcagctactctttcctcttcactttcaccaactgaagccatggaaatctttgct gacctgcagcgagctatgaaaagctttgttctggagaatgatctgcatatcgtctatttg gtcaccccagtgtatgaggagtggaccacgattgattggtaccagtttttctgcttgtgg gagaagctgcctgcctcaatgagacgtgtggctgaactggtggggattgaagaaggcttt ctggctcgctctgtaaagggcaaaatcatagctaaaacagagaaacagcacagacaaatg gccatccacaaaaggtttttcaccagtcttgcccttctggatttgatcagtgaggttccc ttgaaggatatgacaaagaagtatggctgtagtcgtggccagcttcaatccttgcagcag tctgctgctacctatgcaggaatggtgacggttttctgtaatcggctgggctggcacaac atggagctgttgctctctcagttccagagccgcctcacttttggggttcatagggagctt tgtgacctggtacgagtgtctctgctgaatgcacagcgtgctaggatgctttacaatgct ggctttgtcacagtggctgatcttgctaaagccagtcctgatgatgtggcaactgctctg aagaattcagtaccattcaaaagtgttcgtaaggctgtggatgaagacgaagagtcagca gaggagcgtcgagctgtgcgcagcatctggatggctggaatgaaaggcttaacagaaaga gaagcagcttccctcattgtggaagaagccagaagacttctccagcaggatctggcgctg atgggagtgcagtggaacccagagtcttttctcgaatccgatacgtcctctatgatgagc agagagtcagaactggaagacagactacataggtcttccgagtcttctagggcattaagc aaaaaagggtgcggagttcaacattgtaatggccttggctctcagactggaaacttatca aatattaaaaagggatataaaaggcgactaagcagtagtacagaaaactccagatttgag agtgaagtcccaggcgggagacaggctcgatcagaggaaggcaatgatgatattgtgtgc agtcctaggaaacggctaaatgtgtgcagaaataatgaaaatgtagaaggaatttctctg gtcaaaaccaagatggattctaggagagcaattctagaaccttctactgaacaaggaaaa acaccaacattgagaacatatttttcagcctctagattgctaaaaagtatggacatgcat ttaaaccggactaggaacaaaaatactgcttcaaaactacagaggtcacttcttgaagat tcaaatacgcttagtgtagacatacaaaagcctcccgctttccaccccacgatctctaaa gagaattctttttcagaccaaaataataaggaatttatggtaacagggtctgtaactcgt caaatctcaaattctgtacagatgggggcagttactcttgggaagaaagataaaatggaa ggattatttacagagtctaccagcagtaatgaaggcatgcctcaggggagaccatgtttt caggcacctgttacattgcggggtattccacacactgatgtggagacacgtaatattgta gaaagtctagtgatacctgctaatgttaggacacagagaaatgaaaatagggacgataag cagagtaaaataaataaaatgcgaacagatgcgagctgtgctgaggtgatgattggtaag cagcagatggctttagatgcagattgccgtaacgtgacagccagctgctctggaaatgaa catgtccatagtggcagcagggtacagaagcctgtgcgtttttgtcctggtgaggataaa ccctgccatattcaaattcagaatggtggcaaaaatggtagcgaagagtccaatggaata tcgttacaagctgaagcactgcagaaagccaacagtcatcctaaagattttctgaaaaac tctctgatgaaatccagaggtgttcatgatgcaggtgatgttcaggatagtccatcctct gatctgttttctgactttgaagacagcttccagttggatactcaaactgagatgataata aaacaggagggagcagctggaatcacaggacagcagggaatgcaaagttcaaagctggca gtgatcccacggcaggagatctgcaagaaactaagcacttcacggactgagaatgctact gatgaaaggctggctgcaacagttaggaaactgggcttttcaagtcttatcacgacaaat aacgttacaaaaaacacagctcagcactgcagtaataatgttttggagtgtggaggcctt aatttacagcccgtaacaaaggaaatagattctgcaccttaccttaaagaaagcgatttc tcagtgactgactcgcagctacacagttttctacgagattaccacacccaaaatgcagtg aaaggggagactgtgtctaaagaccttgataaagcaacctccccttttggtagggagcac attgtacaaatagaatgccaccctgtccctgaaacaagcctgaatatgagtgatagcttg ctgtttgatgatagcttcagtaatatcagcgaccttgcagctgttcacattacggaagct gacagaaaggaacctgtggagaagcaaggggttttggtttctccagaacatcttttgcag gacctaaggcctgttcagaataagtgtgatgtcagtggcaatcagaaggagcatgaagac tgtgcacagggtaacaatgtatctctagcattctcagaactaatagctgaagttttagat catgcaaactccccgtcttttctggaaggtcttccttctacatttgaccgtcagtcagga ttaagaaacccagtgatgtgtaataatgaccccagatcaaaggatttggtagcagataaa ggtgaaaagctccagagaagccagaaagctttagacaagaaaacccatccagtggtgtgg actgacccctcatttgaactaagcccaggattgcaggatgtattagacaaatggcatagt ccctcaggtattgaaccagtttcagtaagctcctgtttgaaagaaaagttggttgctcct attaccaatcaagagccagatccagtttttgaatctgatcgttgtcatctggagcctttg cccacttgccaggatttaaaaagctatttcaaggttaaagaaaacaagccagaagactcg gattttcagaaaacagactgcattgcacttccactcaagggaagcaacagaacatcctgt ccttcaccagatagtaataatgcgtctattcctccaacacccccaaaaaaggtttttccc aaaagttctgtttctctctctgtgaaatctttaaggaagagacaggttgcctgcatggat gaagggcagctgattcagccacagcagaatagcgagggcaatgcagagcagcaggtaaaa acactccaagtcagtcctgggattgtagagcaaattgaggctgatgagatgaaagatgat tccactatagaccaaggcttttcactgcagctatctcaggatctttctccacttgttccc ttaagcgatgaaagtttcactattattgatgtagcaagtgacaaagcacttttccagact ttccttgcagaatggaaggagaaaagcagattctccatctcagtggcgtgtgaaaaaaca agacgtcttttatctcccaaatcaacgattggtggcaaattcaaaaaagcaagttctcct cagtggaagcaagttaaagatgatggatttcctgtccaaggctgtgaagacatcttggta gttggactggcagtatgttggggtggaagagatgcctattatatctctttgcagcagata caagaccagactgagatcagtatgagtttggcaccgccacctttggacaaaaacctgtct gtaacagagagactgtatcatctgcagctgcacctacagaagaagcccaagcaggagcgc tcacttatcatgtataacttcattcagcattacaagactctggtgatggcttgtggaatc tccttggaaggaaattttgaggatccaaaggttgcttgttggctgcttgattctgactcc aaggaacgtacccttcacaacatggtgacgaactttctccccaacgagctgcctctgctg gaaggggtaggcaccggccaaggggtgcagagcctggggcttagcgccagccgagatcat tctgggcggtacagagcagcaatagagtctgtgcttgtcttcagtgtcatgaaccaactc cataatgaattgcagaaggaaaacctggcagatgtattttctaaagtggagatgcccagc cattattgcttggctctgctggagctgaatggcattggttttagcacaacagcctatgaa acgcagaaacaggtcatgcaagctaaactgagcgagattgagaccaaggcgtatcaactg gctggccacagcttctccttgaccagccctgatgacattgcagaggttttgttcctggag ctgaagttgccacaaaacggagatgtgaaagttcaagggaacaagaagactctgggttat accagaagatcaactgctaaaggaaacagggttaggctgagcaagcaattcagtacaacc aaggatgttttggagaaattaaagacacttcaccccttgccagggctgatattggaatgg aggaggatcaataatgccattactaaagtggtatttccaatacagagggaaaagcgatta aattcggcactgggaatggaaaggatatatccagtgtcacagactcacacagctacaggt cgaataaccttcacagaaccaaatatccaaaatgtgccaagagattttgagattgaaatg ccaattgtggttgaagaaagcccaccctcccgagcccatggaaatgttaattctcgctct gtttctgggggcagatgcagaaagcgttccattgttttgtctcatggcctaaaggttcag gctgaagacagatccaaagaaagaggaataccgtttgctgttagcatgaggcatgccttt gttcccttcccaggtggtttaatcttggcagctgattactctcagcttgaactgaggatc cttgctcatttgtcttgcgactgtcgactcattcaagccttgaacgggggtaccgatgtc ttcaagagcattgcagcagaatggaaaatgattgatcctgaagctgttggagatgggacc aggcaacaagctaaacagatttgctatggaatcatctatgggataggaacaaaatcatta ggagagcagatggggattgatgaagatgaagctgccaattacattgaatccttcaaatca agatacacaggcattcagaaattcttgagggagacagtgaggagctgcaggagagatggg tttgtgcagactatcctgggaagacggagatacctgccagctatcaaagattcaaaccca tacagtaaagctcatgcagaacgacaggccgtgaatacaactgttcagggatctgctgca gacattgtcaaaacagccactgtgaacattcagagacgcctggaagctttctcctctgtg atcaagtcccacggacatctggagagctccttccagagagatcagactggaacgctcggg aggaagagaaacagagggacgttacaccccatcagtggaggtttttttatcctccaactc catgatgagctcctctatgaagtagcagaggatgatgtcatccaggtcgctcagatcgtc aagcatgagatggaaaatgccatcaagctctcggtaaaactgcatgttaaagtgaaaatt ggccctagctggggagacctgcaggacctggagctctga

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