Cellulophaga lytica DSM 7489: Celly_1194
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Entry
Celly_1194 CDS
T01434
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly03410
Base excision repair
cly03430
Mismatch repair
cly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Celly_1194
03430 Mismatch repair
Celly_1194
03440 Homologous recombination
Celly_1194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cly03400
]
Celly_1194
DNA repair and recombination proteins [BR:
cly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Celly_1194
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Celly_1194
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Celly_1194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADY29022
UniProt:
F0RG56
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Position
1330415..1332103
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AA seq
562 aa
AA seq
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MRWTIKPKPDAAKVAELQNALQVDEIVAKLLLQRGITTFEEAKKYFRPQLSDLHDPYLLK
DMDLAIARIEQAIANEENIMVFGDYDVDGTTSVALVSSYLQSYYPNVTTYIPDRYKEGYG
VSYAGIDYADDNDISLIIALDCGVKAVDKVAYAKEKGVDFIICDHHRPGATLPNAVAVLD
AKRNDCNYPYDELCGCGVGFKLIQALGSKRGQTIEDLVPYLDLVATAIGADIVPITGENR
VLAYYGLQVINSTPRAGFKAIINQIKKDVLTITDVVFVIAPRINAAGRMVHGLHAVNLLT
ETNLEQAEEFAAAIEQYNADRRELDQEITKEALVQITDNKEEKHFTSVVYNENWHKGVIG
IVASRLTETYYRPTLVFTKSGEKLAASARSVKGFDVYNALEACADHIEQFGGHKYAAGLT
LSEAQYDGFKKEFEKVVTKTIDPNLLTPEITIDAELNFNEISPKLMRIIKQMEPFGPGNM
SPVFMAENLQDTGYAKGVGQEEAHLKLAAVQNGSNPIGAIGFNLGNKLPLVQNKKPFSAV
FSLDENEWQGVVSLQLKLRDIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccataaaacctaaacctgatgctgctaaagtagccgaactacaaaatgca
ttacaggttgatgaaattgtggctaaactattactacaacgcggtataacaacttttgaa
gaggctaaaaaatactttagaccacaactatcagatttacacgacccatatttattaaaa
gatatggatttggctattgctcgtatagagcaagctattgccaatgaagaaaatattatg
gtttttggcgattatgatgtagatggcacaacttctgttgcgttagtatcatcttattta
caaagttactaccctaatgttactacatatattccggatagatataaagaaggttatggt
gtgtcttatgccggtattgactatgcagatgataatgatattagtctaattattgcatta
gattgtggtgtaaaagcggtagataaagttgcttatgcaaaagaaaaaggtgtagatttt
attatttgtgaccaccacagacctggtgctacgttaccaaatgctgttgctgttttagat
gccaaaaggaacgattgcaattacccgtatgatgagctttgtggttgtggtgttggtttt
aaattgatacaagctttaggtagcaaaagaggacaaactatagaggatttagtaccttat
ttagacttggttgctacggcaattggtgcagatattgtccctattactggcgaaaatagg
gtgcttgcctattatggattacaggttattaatagtacgcctagagctggttttaaagct
attataaatcagattaaaaaagatgtacttactattacagatgttgtttttgtaattgct
cctcgtataaatgctgcgggacgtatggtacacggtttgcacgctgttaatttacttacc
gaaacaaatttggagcaggcagaagaatttgctgctgccattgaacagtacaatgcagat
aggcgagaactagaccaagaaattaccaaagaagctttagtacaaattacagataacaaa
gaagaaaaacattttacctctgtagtttataatgaaaattggcacaaaggtgttattggc
attgtagcatctagactaacagaaacgtattacagacctactttagttttcactaaaagc
ggcgaaaaactagctgcatctgcacgctctgtaaaaggttttgatgtttacaatgcactt
gaagcttgtgcagaccacatagaacaatttggaggccataaatatgctgctggtttaacc
ttatctgaagcacagtatgatgggtttaaaaaagaatttgaaaaagttgttacaaaaact
atagatcccaaccttttaactcctgaaattactatagatgcagagcttaattttaatgaa
ataagtccaaaattaatgcgaattattaaacaaatggaaccttttggcccaggtaatatg
tcgcctgtatttatggcagaaaacctacaagacacaggttatgccaaaggcgtagggcaa
gaagaagcgcatttaaaattagctgctgtacaaaacggttctaacccaattggagctatt
ggttttaatttaggaaataaattgcctttagtacaaaacaaaaagccttttagcgctgtt
ttttctttagacgaaaatgagtggcaaggggttgttagcttacaattaaaacttagggat
attagataa
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