Chlamydotis macqueenii (Macqueen's bustard): 104480651
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Entry
104480651 CDS
T08437
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104480651 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104480651 (CNOT1)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104480651 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104480651 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104480651
NCBI-ProteinID:
XP_010119939
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNSDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQQF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggaaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccattgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctgcgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgtcgaggaatgtcgcaacattatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagagttttggggatgatggctcgaact
cattcagggttgacggatggtattccattacaatctatttcggcacctggcagtgggatt
tggagtgacgggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaaccctagtctggacttcaaagtagtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagttttcccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcttgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggacttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttactgcagatcaacacgtcgtggcataccttgcgccat
gaactcatctccacgctcatgccaatcttcctcggcaaccatcccaactctgctatcatc
ttgcactatgcgtggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaactgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtacgccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagagaagatgtccatctatccttggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcaactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagcgaactgcagtaatgtc
atgaacaaggctaggcagccaccacctggagtcatgccaaaaggacgcccgcccagtgct
agcagcttggatgccatctctcctgtacagatcgactcgcttgcaggaatggcgtctctt
agtttaggtggctcagctgctcctcatactcagagcatgcaaggcttccctccaaacctg
ggctctgcattcagtactcctcagtcaccagcaaaagcattcccccctctctccacccaa
aaccagacaacaggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagtctgactggcataggaactggagccctgggccttcctgcggtgaac
agtgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcaattt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttataaccatccgccg
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctcttcggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcgtccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacaattcccgcatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtgagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagaccaaactgagagaattgtggagccaccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagcctaactttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcggat
aaagctgcggccaacttctcagaccgttccttgttaaagaatcttggtcactggctagga
atgattacgctggctaaaaataagcccatcttgcacacagatttggatgtgaaatcgcta
ctgctggaagcatacgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccgtggacaatg
gccattatgaatgtgttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttatcac
gacatcaacgtctattcattaggaggcttggctccacatattaccttaaatccaacgatt
ccgctgtttcaagcccacccgcagctgaagcagtgtgtgcggcaggcgatagagcgagca
gtgcaagagcttgtccatccagtggtcgatcggtccattaagattgccatgactacttgt
gagcagatagtcaggaaggactttgcgctggattcagaggagtcacggatgcgtgtggcc
gcacaccatatgatgcggaacctgactgctgggatggccatgattacctgcagggaacct
ttgctgatgagcatagctaccaacttgaaaaatagttttgctaccgcactgagggcagcc
tccccacaacagagggacatgatggagcaggcagctgcccagttagcgcaggataactgt
gagctagcatgctgctttatccagaagacagctgtggagaaggcaggccccgagatggac
aagagactcgcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgtcgttttaacctaccaggctgagcggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
caagcttgggctacagatgatgtagcacaaatctatgacaaatgtatgacagaactggag
cagcatctgcagtccattccacacaccctggccatgaatcctcaagctcaagcgttgcgc
agcctcttggaggctgtggtagtggctcgtaactcccgtgatgctattgctgcacttgga
ctgctgcaaaaggctgtagagggcttgctggatgccaccagtggggcagatgccgacctc
ctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggatggccgcgca
tatggatctccatggtgtaataaacaaatcactaggtgcctgattgaatgcagagatgag
tacaagtacaacgtggaagctgtggagctgctaatccgcaaccaccttgttaacatgcag
cagtatgaccttcacttggctcagtcaatggagaatggcttgaactacatggctgtggca
tttgcaatgcagttggtaaagatcctgttggtggatgagagaagtgtcgcccacataaca
gaggcagatctttttcacacaattgagacactcatgaggattaatgctcattccagagga
aacgccccggaaggattaccccagctgatggaagtggtccgatcaaactatgaagcaatg
attgaccgtgctcatggaggtcccaatttcatgatgcattcaggaatttcccaagcctct
gagtacgatgatccaccgggtctgagggagaaggcagagtacctgctgagggagtgggtg
aacctctaccattcagctgctgcaggccgtgacagtaccaaagcattctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaaaacggatgacctgatcacccgctttttccgt
ctttgcaccgaaatgtgtgttgaaatcagctatcgtgctcaggctgagcaacagcataat
cctgctgccaaccccactatgattcgagccaagtgctaccacaatctggatgcttttgtg
cgacttattgcattgctagtgaagcactctggggaggcaaccaacacagttacaaagatc
aacctcctgaataaggttcttggtattgtggtgggagttcttctgcaagaccatgatgtt
cgacagagtgagtttcagcagcttccttaccatcgcatttttatcatgttgctgttggaa
ttaaatgctcctgagcacgtgctggagaccatcaacttccagacactcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttattgatcgatcttttcaagtacttggctcctttccttaga
aatgtggaactcaccaaacctatgcaaattctttacaagggcactctacgtgtgttgctg
gtcttgttgcatgatttcccagaatttctttgtgactaccactatgggttctgtgatgtg
atcccacctaactgtattcagctaaggaatctgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaatctaaaggtggacatgttaagtgagattaatatt
gcaccacggatactcacaaatttcactggagtgatgccacctcagttcaagaaagacttg
gattcctatctcaaaacccgttctccagtcacctttttgtctgacttgcgcagcaaccta
caagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgccctggtgctc
tacgtaggtactcaagctattgcgcacattcacaacaaaggcagcacaccctctatgagc
accatcacccactcagctcacatggacatcttccagaatttggcagtagacctggacact
gaaggccggtaccttttcttgaacgcaattgccaatcagctgcgatatcccaacagtcac
acccactacttcagttgcaccatgctgtacctgtttgcagaggccaacactgaggctatc
caggagcagatcactagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctccttattaccttcattgagctgataaaaaatccagcgtttaaattctggaaccat
gagtttgttcactgcgctccagaaattgagaagttgttccagtcagttgcacagtgctgc
atggggcagaagcaggcccagcaagtaatggaagggactggtgccagttag
DBGET
integrated database retrieval system
