Chlamydotis macqueenii (Macqueen's bustard): 104481931
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Entry
104481931 CDS
T08437
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04510
Focal adhesion
cmac04512
ECM-receptor interaction
cmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104481931 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104481931 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104481931 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmac00535
]
104481931 (COL9A1)
Proteoglycans [BR:
cmac00535
]
Extracellular matrix (ECM) proteoglycans
Others
104481931 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104481931
NCBI-ProteinID:
XP_010121572
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MARALRGLLPLGLFLQVVCLCLAQRGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPGP
PGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLLGPP
GPAGAAGLPGEVGRTGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGHA
GLMGMKGHKGAKGEPGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGTK
GARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGEPGLPGVD
GREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGMKGIHGPKGNRGPPGVPGLMGNS
GKPGQQGPEGEAGPTGPRGPPGSRGEPGPVGPPGLPGKLGPQGDIGLPGLPGPPGLTGGK
GDRGSAGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGSRGPEGSRGLP
GMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRR
PEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGER
GFPGRGLKGHPGPRGLPGEPGKASYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCEP
SSCRMEAGQRVDKNMKGP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggctctgcggggcctcctgcccctggggcttttcctgcaggttgtttgcctc
tgcctggcgcaaagaggtctccctggtccaccaggccccccgggtccaccagggccacca
ggagttcccggtattgatggcattgatggggagagaggtccgaacggcccccccggccca
cccggcccagatggggatgcaggcaaaccaggatcccctggcctgcctggagagccggga
gctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggacagaag
ggtgagccaggattgccaggtgctcgtggacttcccggcaaggggcttcttggaccacct
ggcccagctggtgcagcaggacttcctggggaagtaggtcgtactggtccacctggagat
ccaggaaaaagagggccaccagggccaccaggaccaccaggccctcggggaacaattggc
ctgcaagatggtgacccattgtgtcccaatgcttgtccacctggccgcccaggacatgct
ggcttaatgggaatgaagggacacaaaggtgctaaaggagagcctggtgaaccaggaaaa
caaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaaggc
cctccaggcatcctaggtatcagaggtataactggaataatgggacctaaaggtaccaaa
ggagctcgtgggcttgatggtgagcctggtccccaaggtcttcctggtgcacctggggat
caaggacagagaggtccactgggagaggcaggtccaaagggagaaaggggccctcaaggt
acaagaggaataaatggtctccctgggcctaaaggagagcctggcttaccaggagttgat
ggccgggaagggatccctggaatgcctggagcaaaaggtgaaccagggaaacccggagct
ccaggtgatgcagggcttcagggacttccaggtttaccaggctctccgggtatgaaaggc
attcatggaccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaattct
ggtaaaccgggtcagcagggcccagagggagaagcaggtccaacaggaccccggggtcca
ccaggtagcagaggggagccaggtcctgtgggtcctccaggtttaccagggaaattgggt
ccccagggtgatattggacttcctggactgccaggtcctccaggcctaactggtggtaaa
ggtgaccggggttcagcgggtgaaccaggacctaagggtgaacaaggtgcacctggagca
gaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaaggga
gctgttggtaatcctggagaccctgggtcccgtgggcctgagggaagtcggggactgcct
ggcatggaaggacctcgaggctcacctggaccacgaggcttgcagggtgaacagggtgcc
ccaggtctgcctggcagccaaggtccagctggaaaagaaccatctgatcagcatattaag
caggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttaggagg
ccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgctccagggcct
gctggtgaaaatggcttcccaggacagcttggaccccgtggcttgcctggccttaaaggt
ccccctggtgagattggtcgtaaaggccctaaaggtgaaccaggagaaagaggagaaaga
ggatttccaggcagaggactgaaaggtcaccctggaccaagaggtcttccaggtgaacca
ggcaaagccagctatggcagggaaggccgcgatggtgaacgaggtctccctggggtggcc
ggtcagcctggggttcccggtcctcctggccctcctggcccccctgggtactgtgagcca
tcgtcttgcagaatggaggctggacagagagttgataagaacatgaaagggccttga
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