Pacificitalea manganoxidans: CBW24_13690
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Entry
CBW24_13690 CDS
T05128
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cmag
Pacificitalea manganoxidans
Pathway
cmag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBW24_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmag03021
]
CBW24_13690
03400 DNA repair and recombination proteins [BR:
cmag03400
]
CBW24_13690
Enzymes [BR:
cmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBW24_13690
Transcription machinery [BR:
cmag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBW24_13690
DNA repair and recombination proteins [BR:
cmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBW24_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ATI42952
UniProt:
A0A291M1Z4
LinkDB
All DBs
Position
complement(2989769..2993905)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAKTFLGQKRLRKYYGKIREVLEMPNLIEVQKSSYDLFLKSGDQPDPLDGEGIKGVFQSV
FPIKDFNETAVLEFVKYELEKPKYDVEECQQRDMTYSAPLKVTLRLIVFDIDEDTGAKSV
KDIKEQDVFMGDMPLMTPNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGLDQEGIMDAYYNTVQFELQQ
NRGWRTPFFPDRVRGTRPTYDLIDADTGEVIAKAGDKVTPRTVKKLKDEGSVTHLLLPYD
QIVGRFVAKDIINEDTGAIYVEAGDELTLEYSKDGDVTGGTLKDLLDAGITEIPVLDIDN
ISVGPYIRNTVAMDKNMNRDSALMDIYRVMRPGEPPTVEAASALFDTLFFDSERYDLSAV
GRVKMNMRLNLDAEDTQRTLRREDIIACIKALVELRDGRGEIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLATYAR
VNKYGFIETPYRVVKDGQVTDEVHYMSATEEMRHTVAQANANLDGEGKFINDLVSTRQSG
EYMLAPNENVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRAEAPLV
GTGIEEVVARDSGAAIMAARGGIIDQVDAQRIVVRATSDLEPGDPGVDIYRLRKFQRSNQ
NTCINQRPLVKVGDTVQKGEVIADGPSTEMGELALGKNVIVAFMPWNGYNYEDSILISER
IAYDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDFGTVVEVRVFNRHGVEK
DERALQIEREEVERLSRDRDDELVILDRNIYARLSSMLLGKVAVKGPRGFKANTEVTQDT
LDTLSKGHWWQLALEDEADAAQIEALHAQYEAQKRALDARFEDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQPGDKMAGRHGNKGVISRVVPVEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWASRGLGIQIDEALQGYRRSGDLTPVKEALRIAYGDDVYEEGFTDANDDR
VIEAATNVTRGVPIATPVFDGAKEPDVNDALKRAGFDQSGQSVLFDGRTGEQFARHVTVG
VKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDSEGED
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccttcctcggccagaagcgactccgcaagtattacggcaagatccgtgaa
gtcctggagatgccgaacctcatcgaggttcagaaatcctcctacgacctgttcctgaaa
tccggcgaccagcccgacccgcttgacggcgaaggcatcaagggcgtgttccagtcggtt
ttcccgatcaaggatttcaacgagactgccgtgctcgaattcgtgaaatacgaactcgaa
aagcccaaatacgacgtcgaggaatgtcagcaacgtgacatgacctacagcgccccgctg
aaggtgaccctccgtctgatcgtgttcgatatcgacgaagataccggcgcgaaatccgtc
aaggacatcaaggaacaggacgttttcatgggcgacatgcccctgatgacgccgaatggc
acctttgtcgtcaacgggaccgagcgggttatcgtgtcccagatgcaccggtcgccgggc
gtgttctttgaccacgacaagggcaagacccattcctcgggcaaactgctgttcgcctgc
cgcatcattccctatcgcggctcctggctcgatttcgaattcgacgccaaggacatcgtg
tttgcacggatcgaccgtcgccggaagctgccggtaacgaccctgctttatgcgctgggt
ctcgatcaagaaggcatcatggatgcctattacaacactgttcagttcgaactgcagcag
aaccgcggctggcgcacgccgttcttcccggatcgcgttcgcggcacccgtccgacctat
gacctgatcgacgccgataccggcgaagtgatcgcaaaggccggcgacaaggtgaccccg
cgcaccgtgaagaagctgaaggacgaaggctccgtcacccacctgctgctgccctacgac
cagatcgtgggccggttcgtggcgaaggacatcatcaacgaggacaccggcgcgatctat
gtcgaagccggcgatgagctgacgctcgaatactcgaaggatggtgacgtcaccggcggc
acgctgaaggatcttctggacgcgggcatcaccgagattccggtgctggacatcgacaac
atttccgtcggtccctacatccgcaacaccgtcgcgatggacaaaaacatgaaccgcgac
agcgcgctcatggacatctaccgcgtcatgcgtccgggtgagccgcccaccgtcgaggcc
gcctccgcgctgttcgacacgctcttcttcgatagcgagcgttacgacctgtccgccgtg
ggccgggtcaagatgaacatgcgtctcaacctcgatgccgaagacacccagcgcaccctg
cgccgcgaagacatcatcgcctgcatcaaggcgctggtcgaactgcgcgatggccgtggc
gaaatcgacgacatcgaccacctcggcaaccgtcgcgtgcggtccgtgggcgaactgatg
gaaaatcagtatcgcgtcggcctgctgcggatggaacgcgccatcaaggagcgtatgtcc
tctgtcgagatcgacaccgtgatgccgcaggatctgatcaacgccaaacccgccgccgcg
gctgtgcgtgaattcttcggctcctcgcagctgtcgcagttcatggaccagaccaacccg
ctgtcggaagtgacgcataagcggcgcctgtcggccctcgggccgggcggtctgacccgt
gagcgtgccggtttcgaagtgcgcgacgtgcacccgacccactatggtcggatgtgcccg
attgaaacgccggaaggcccgaacatcggtctgatcaactcgctggccacctatgcccgc
gtgaacaaatatggcttcatcgaaaccccctaccgggtggtgaaggacgggcaggtgacc
gatgaggttcactacatgtccgccaccgaggaaatgcggcacaccgtggcgcaggcgaac
gccaacctcgacggtgaaggcaagttcatcaacgatctggtcagcacccgccagtcgggc
gaatacatgctggcgccgaatgagaacgtggacctgatcgacgtctcgccgaaacagttg
gtttcggtcgccgcatcgctgatcccgttcctcgaaaacgacgacgccaaccgcgctctc
atgggctcgaacatgcagcgtcaggcggttccgcttctgcgggccgaggcaccgctggtc
ggcaccggcatcgaagaagtcgtggcacgggattccggtgcggcgatcatggctgcgcgc
ggcgggatcatcgatcaggtcgatgcccagcgtatcgtcgtgcgcgccaccagcgatctg
gagccgggcgatcccggcgtggacatctaccgtctgcgcaagttccagcgttcgaaccag
aacacttgcatcaaccagcgtccgctggtgaaggtgggcgacaccgttcagaagggcgaa
gtcattgcagatggcccctcgaccgagatgggcgaactggctctgggtaaaaatgtcatc
gtcgcgttcatgccgtggaacggctacaactacgaagactcgatcctcatctccgagcgg
atcgcctatgacgacgtgttcacctcgatccatatcgaggaattcgaagtcgccgcgcgt
gacacgaagctcgggccggaagagatcacccgcgacattccgaacgtcggcgaggaagcc
ctgcgcaacctcgacgaggcgggcatcgtctatatcggtgcagacgtggaaccgggcgac
attctggtcggtaagatcacgccgaagggcgaaagcccgatgacgccggaggagaaactc
ctgcgcgccatcttcggtgagaaggccagcgacgtgcgcgatacctcgctgcgggtcaag
ccgggcgatttcggcaccgtcgtcgaagtgcgcgtcttcaaccgtcacggcgttgagaaa
gacgaacgtgcattgcagatcgagcgtgaagaagtcgagcgtctgtcgcgtgaccgggac
gacgagctcgtcatccttgatcgcaacatctacgcacgtctgagctcgatgctgctgggc
aaggtggcggtcaaaggcccgcgcgggttcaaggccaacaccgaagtcacgcaggacacg
ctggacaccctgtccaaaggtcactggtggcagctggcgctggaagacgaggccgacgcg
gcccagatcgaagccctccacgcgcagtatgaggcgcagaagcgcgctctcgacgcgcgg
ttcgaggacaaggtcgagaaggtccgccgcggcgacgacctgccgccgggcgtgatgaag
atggtcaaggtgttcgtggcggtgaagcgcaagctgcagccgggcgacaagatggccggt
cgtcacggcaacaagggtgttatttcccgcgttgtgcccgtcgaagacatgccgttcctt
gcggatggcacgcccgtcgatttctgcctcaacccgctcggcgtgccgtcgcggatgaac
gttgggcagatccttgagacccatatgggttgggcgtcccgtggcttgggcatccagatc
gacgaggccctgcagggctatcgccgctccggcgacctgaccccggtcaaggaagcgctc
cgcattgcctatggcgatgacgtctacgaagaaggcttcaccgatgccaacgacgatcgc
gtgatcgaggcggccaccaacgtgacccgtggtgtgccgatcgcgacgccggttttcgac
ggtgccaaggagcctgatgtcaacgatgcgctgaagcgtgcaggtttcgatcagagcggc
cagtccgtcctgttcgatggtcgcacgggcgagcaattcgcacgtcatgtgaccgtgggt
gtcaaatacctgctgaagctgcatcacttggtggacgacaagatccacgcccgttcgacc
ggcccctacagcctcgtcacccagcagccgttgggtggtaaggcgcagttcggtggtcag
cgcttcggggagatggaggtctgggcattggaggcctatggcgccgcctacaccctgcag
gagatgctcaccgtcaaatcggacgacgttgcaggccggaccaaggtctacgagtcgatc
gtcaagggcgaagacaacttcgaggctggcgtgccggaaagcttcaacgtgctggtcaaa
gaggtccggggtctgggcctcaacatggaactcctggactcggagggagaggactga
DBGET
integrated database retrieval system
