Cobetia marina: BFX80_00720
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Entry
BFX80_00720 CDS
T04789
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cmai
Cobetia marina
Pathway
cmai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFX80_00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmai03021
]
BFX80_00720
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_00720
Enzymes [BR:
cmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFX80_00720
Transcription machinery [BR:
cmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFX80_00720
DNA repair and recombination proteins [BR:
cmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFX80_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AOM00115
UniProt:
A0ABU9GHW3
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All DBs
Position
156086..157084
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AA seq
332 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEVSAHHARIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IEGVLHEYSAIEGVQEDVIEILLNLKDVAIKMHGRDEAVLALNKKGPGIVTAGDIAGDHD
LEIVNPDHVIAHLNDGGELKMQLKIARGRGYEPADARLSADDESRAIGRLQLDATFTPVR
RVSYAVEAARVEQRTNLDKLVIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQE
VEEEEDQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLN
EIKDVLSARGLSLGMRLENWPPASLKDDKASA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctcagtgacagagtttctccgtcctcgcgatatcaaggtcgaggaagtcagc
gcccatcatgcgcggatcgtcctcgagcccttcgagcgtggtttcggccacaccctgggg
aatgctctgcgtcgcatcctgctgtcttccatgcccggctgtgccgtcgtggaagctgag
atcgaaggcgttctgcacgagtacagcgccattgaaggggtacaggaggatgtcatcgaa
atcctgctgaacctcaaggacgtggccatcaagatgcatggtcgcgacgaagctgtgctg
gcgctgaacaagaagggcccgggcatcgtgactgctggcgacatcgccggtgaccatgat
ctcgaaatcgtaaatccggatcacgtcatcgctcacctgaatgatggtggcgagctgaag
atgcaactcaagatcgctcgtggccgcggctacgaaccggctgacgcgcgtctctctgca
gatgacgaatcacgtgccattggccgtctccagctggatgcgaccttcacgccggttcgc
cgggtctcctatgctgtcgaggcggcgcgtgttgaacagcgcaccaaccttgacaagctg
gtgattgacctggaaaccgacggcacgctggatccggaagaagcgatccgccgctccgca
accatcttgcaggagcagctggccgccttcgttgatctggaagcagacaaggaacaggaa
gtcgaagaagaggaagatcaaatcgatccgatccttctccgtcccgtagacgatcttgag
ctgaccgttcgcagtgcgaactgtctcaaggccgagaatatctattacatcggtgatctc
attcagcgcaccgaagttgagctgctgaagaccccgaatctcggcaagaagtccttgaat
gaaatcaaggacgtgctgtccgcgcgtggtctgtccctcggcatgcggttggaaaactgg
ccgcccgcaagcctgaaggacgacaaggcttccgcttaa
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