Croceicoccus marinus: A9D14_05925
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Entry
A9D14_05925 CDS
T04890
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cman
Croceicoccus marinus
Pathway
cman03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9D14_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cman03400
]
A9D14_05925
DNA repair and recombination proteins [BR:
cman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9D14_05925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9D14_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
DnaJ_CXXCXGXG
ATPase
AAA_21
APS_kinase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ARU15806
UniProt:
A0A1Z1FAQ6
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All DBs
Position
1232459..1235368
Genome browser
AA seq
969 aa
AA seq
DB search
MSLTTISVRGAREHNLKGIDIDLPRDALIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMHKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVP
YSPATGLPIEAQTVSNMVDRVMALPEGTRAYLLAPVVRGRKGEYRKELAEWQKAGFTRVR
IDGEIHQIEDAPALDKKFKHDIEVVVDRLAVRRSKDGQGGIETRLADSFETALRLADGLA
YVDLADGVVPGREGEEQAGGNLKGAGIPANRIVFSERFSCPVSGFTIEDIEPRLFSFNAP
QGACPVCDGLGEKLLFDPQLVVPNEGLSLKKGAVVPWAKSNPPSPYYMQVLASLANHFGF
ELETPWEQLAEEHRSAILFGTKGKPVPLTFKDGRKSYTVNKAFEGVIGNLNRRMLQTESA
WMREELGKFQTAQPCEACGGARLNEKARAVKVAGTDIAGPVRLSVSDAKRWFLELEDKLG
DQQKQIAKAILKEINERLGFLDNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVL
YVLDEPSIGLHQRDNDRLLETLKRLRDLGNTVIVVEHDEDAIRAADHVVDLGPGAGVHGG
EIVAQGTLKQVLKSKNSLTAAYLNGTRAIEVPKKRRKGNGKKITVHGAVANNLKDVTGEI
PLGTFTCITGVSGSGKSSFTIDTLYAGAARALNGARVIAGPHQKITGLDHCDKVIEIDQS
PIGRTPRSNPATYTGAFTNIRDWFAGLPESQARGYKPGRFSFNVKGGRCEACQGDGLIKI
EMHFLPDVYVTCEECGGKRYNRETLEVKFKGRSIADVLDMTIEDAEEFFSAVPPIRDRMH
MLNEVGLGYVKVGQQATTLSGGEAQRVKLAKELARRSTGQTLYILDEPTTGFHFEDVRKL
LEVLHRLVDQGNSVVVIEHNLDVIKTADWILDLGPDGGVRGGEIVAVGTPEDVVKVERSY
TGRYLAGML
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagccttacgaccatctccgtgcgcggggcgcgcgaacataacctaaaaggtatcgac
atcgatctgccgcgcgacgcgctgatcgtgatcacgggcctctccggctcgggcaagtcg
agcctggctttcgacaccatctatgccgagggtcagcgccgctatgtggaatcgctgagc
gcctatgcgcgccagttccttgagatgatgcacaagcccgatgtcgagcatatcgacggg
ctgtcgcccgccatctcgatcgagcagaagaccacgtcgcgcaacccgcgttccaccgtg
gcgacggtgaccgagatctacgactacatgcgcctgctttgggcgcgcgtcggcgtgccg
tactcgcccgccaccggccttccgatcgaggcgcagaccgtttccaacatggtcgaccgc
gtgatggccctgcccgaaggcacgcgcgcctatctgctggcccccgtggtgcgcggccgc
aagggcgaataccgcaaggaactggccgaatggcagaaggcgggcttcacgcgcgtccgc
atcgacggcgagatccaccagatcgaggacgcccccgcgctcgacaagaagttcaagcac
gacatcgaagtcgtggtcgaccgcctcgccgtgcgccgaagtaaagacggacaagggggg
atcgagacgcgccttgccgacagtttcgaaaccgcgctgcgccttgccgacggcctcgcc
tatgtcgacctcgccgacggcgtcgtgccgggacgcgagggcgaggaacaggcgggcggc
aatctgaaaggcgcgggcatccccgccaaccgcatcgtcttttccgaacgcttttcctgc
cccgtcagcggcttcacgatcgaggatatcgaaccgcgcctgttctcgttcaacgcgccg
cagggcgcttgcccggtgtgcgacgggcttggcgagaagctgctgttcgacccccagctg
gtcgtccccaacgaagggctcagcctgaagaagggcgcggtcgtgccctgggccaagtcc
aacccgccgtcgccctattacatgcaggtgctcgccagcctcgcgaaccatttcggcttc
gaactcgaaaccccgtgggaacagctggccgaggaacaccgcagcgccatcctgttcggc
accaagggcaaacccgtgccgctgaccttcaaggacggccgcaagagctataccgtcaac
aaggcgttcgagggcgtgatcggcaacctcaaccgccgcatgctgcagaccgaaagcgcc
tggatgcgcgaggaactgggcaagttccagaccgcccagccttgcgaggcctgcggcggc
gcccgcctcaacgaaaaggcacgcgcggtgaaggtcgcgggcacggacatcgcgggcccc
gtccgcctctcggtcagcgatgccaagcgctggttcctggaactcgaagacaagctcggc
gaccagcagaagcagatcgccaaggccatcctgaaggaaatcaacgaacgcctcggcttc
ctcgacaatgtcgggctcgactacctcaacctcgaccgcaccagcggcaccctgtccggc
ggcgaaagccagcgcatccgcctcgccagccagatcggcagcgggctgtcgggcgtgctc
tacgtgctcgacgaaccctccatcggcctgcaccagcgcgacaacgaccgcctgctggaa
accctgaaacgcctccgcgacctcggcaacaccgtcatcgtcgtcgaacatgacgaggac
gcgatccgggccgccgaccacgtggtcgacctcggccccggcgccggtgtccacggggga
gagatcgtcgcccagggcacgcttaaacaggtgctgaagtccaagaactcgctcaccgcc
gcctatctcaacggcacccgcgcgatcgaggtgcccaagaagcgccgcaagggcaacggc
aagaagatcaccgtccacggcgcagtcgccaacaacctcaaggacgtgacgggcgagatc
ccgctcggcaccttcacctgcatcaccggcgtgtcgggatcgggcaagtcgtccttcacc
atcgacacgctctatgccggggcggcgcgggcgctgaacggcgcgcgcgtcatcgccggg
ccgcaccagaagatcaccggcctcgaccactgcgacaaggtgatcgagatcgaccagtcc
cccatcggccgcaccccgcgctcgaacccggcaacctacaccggcgccttcaccaatatc
cgcgactggttcgccggcctgccggaatcgcaggcgcgcgggtacaagccggggcgcttc
agcttcaacgtcaagggcggccggtgcgaggcgtgccagggcgacggcctcatcaagatc
gagatgcacttcctgcccgacgtctatgtgacgtgcgaggaatgcggcggcaagcgctac
aaccgcgagacgctggaggtgaagttcaagggccgctccatcgccgacgtgctcgacatg
acgatcgaggatgccgaggaattcttctccgccgtgcccccgatccgcgaccgcatgcac
atgctgaacgaggtggggctgggctatgtgaaggttggccagcaggcgaccaccctgtca
gggggcgaggcgcagcgcgtcaagctcgccaaggaactcgcgcgccgctccaccggacag
acgctctacatcctcgacgagccgaccaccggcttccatttcgaggatgtgcgcaagctc
ctcgaagtgctccaccgccttgtcgaccagggcaactccgtcgtggtgatcgagcataat
ctcgacgtcatcaagacggcggactggatcctggacctcggccccgacggcggcgtgcgc
ggcggcgagatcgtcgcggtgggcacgcccgaggatgtggtgaaggtggagcggagctat
acggggcggtatttggcggggatgttgtag
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integrated database retrieval system