Colossoma macropomum (tambaqui): 118806092
Help
Entry
118806092 CDS
T09004
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118806092 (scn1laa)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118806092 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
PKD_channel
IQ
Motif
Other DBs
NCBI-GeneID:
118806092
NCBI-ProteinID:
XP_036423313
LinkDB
All DBs
Position
Unknown
AA seq
1975 aa
AA seq
DB search
MAQMFEPPGPDSFHPFTRESLKAIENRIAEENAKKNKEDQERNIDDEDETKQPNRDLEAG
KKLPLIYGDIPNGLVSTPLEDMDPFYCNQKTFIVLNRGKTIFRFNATPALYVLSPFNLLR
RISIKILVHSLFSMIIMCTILTNCAFMTLSEPPDWAKNVEHTFTGIYIFESLIKILARGF
CIGKFTFLRDPWNWLDFSVIVMAFVTEFVKLGSLSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCIRVPPNATLHENGTLTFNGSN
NVPEWFVNYAKEEYNQYKISGKKDAMICGTARDAGQCPEGFVCRKAGRNPNYGYTSFDSF
GWAFLSLFRLMTQDYWENLYQQTLRASGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEE
QNQATIAEAQQKEEEFQAMLEQLKKQQADAQAVAAGYDSGDFSGGMTDTSSEASKLSSKS
AKERRNRKKKRKQREEEEEKGDCEKVHNSESESSIRRPSFRFSLDGNRLPYDRTYTSPHQ
SVLSIQGSVFTPRRDSRASIFSFRGRLGSENDFADDEHSAFEDTGSQRGSLFLPHRSERL
YSTVSKGSLSPRILLPTNGKVRCSVDCNGVVSLVAGRSLPSSPAGLLLPEVTIDKATTDD
NEDTQEEYRMRYDSHQPSPGYLDDQIARQRALSVASIITNTMEELEESRQKCHPCWYRFA
HTFLIWECSPTWVKIKKTVHMVVMDPLVDLSITICIVMNTVFMAMEHHPMDKDFGAMLAV
GNYVFTGIFTAEMIFKIIALDPYYYFQEGWNIFDSIIVSLSLMELGLANVSGMSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQLFGKSYKINVMN
ISTDGSLPRWHMCDFFHSFLIVFRVLCGEWIETMWDCMVVSGQPKCLIVFLMVMVIGNLV
VLNLFLALLLSSFSADNLAATDDDSELNNLQIAVGRIERGIAFLKACLRRYFQSACLRRR
KKKASEEDGLKNSKKLTDISNHTTVELSKDPGSMKTVAGADNDSENFIVNSGLTVTVPIA
TAESDPECHNMEDFSSYSSDMEEDKEKLSVMSSSEGSTVDIRPLREGGESLDFELEESMD
PEACFTDGCVRRFPCCQVSVEKGRWKTWWTVRRTCYRIVEHNWFESFIIFMILLSSGALA
FEDIYIEEYKRLKMVLEYADKVFTYVFMLEMLLKWLAYGFAKYFTNAWCWLDFLIVDVSL
ISLVANALDCSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLI
FWLIFSIMGVNLFAGKFYECVNITSGARFNETEVTNKTECEQLGNNTARWKNLKINFDNV
GAGYLALLQVATFKGWMDIMYAAVDSRNVDEQPKYEANLVMYIYFVGFIIFGSFFTLNLF
IGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKLQKPIPRPANKLQGFIFDIV
TNQAFDICIMILICLNMVTMMVETEDQSESQKAILYWINLIFIVLFTMECALKMISLRQY
FFTVGWNIFDFVVVILSIVGTCVSGVIEYFVSPTLLRVIRLARIGRILRLIKGARGIRTL
LFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQ
ITTSAGWDSLLSPILNTKPPDCDPTKEHPGSKVKGDCGSPSVGIFFFVSYIIICFLIVVN
MYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPKATQFMEYNKLSDFADALDPPL
RIPKPNKIQLINMDLPMVSGERIHCLDILFAFTKHVLGEGGEMDVLRGQMEDRFMASNPS
KVSYEPITTTLRRKQEDMSAVIIQRAYRTHVVRHSMKQASNTYKDTPQENGKVSHKDSVA
RDNFNNHSTSDKGDTTPSTAIPPSYDNVTQGGKDKYEKDKREKEVKGKDNKERKK
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatgtttgaaccaccaggaccagacagcttccacccgtttacccgcgagtca
ctcaaggccatcgagaaccgaatcgcagaggagaacgccaagaagaataaagaagatcag
gagagaaatattgatgatgaggatgaaacaaaacaacctaacagagacttggaggcaggg
aagaaacttccactcatatatggggacatacccaacggactcgtgtccacaccactggag
gatatggacccattttattgcaatcagaaaacctttatagtattgaacagagggaagaca
atcttccgattcaacgccactcctgccttgtacgtcttaagccccttcaaccttcttagg
agaatatcgataaaaattttggtgcattcgctgttcagcatgataataatgtgcactatc
cttactaattgtgcatttatgaccctgagtgaaccccctgactgggccaaaaatgttgag
cacacttttacagggatatatatatttgaatcactaataaagatcctagccaggggcttc
tgtatagggaaattcaccttcctcagagacccatggaactggctagacttcagtgttatt
gtgatggcgtttgtaacagagtttgtaaagctaggcagtctatcagctctccgcacattc
agagtactgagagctttgaaaactatttcggtaatcccaggcctgaagaccattgtagga
gcgctgatccagtcggtaaagaagctttcagacgtcatgatcctgaccgtcttctgtctg
agtgtgtttgccctgattggtttgcagctcttcatggggaacctaaagcaaaagtgcata
cgagtaccacccaatgctacgttacatgagaatggaaccctgacttttaatgggtctaat
aatgttccggaatggttcgtcaactacgctaaagaggaatataatcagtataaaatatct
ggaaagaaagacgcgatgatctgtggaacagcgagagatgcagggcagtgtccagagggt
tttgtctgccgtaaagcaggcaggaatccaaactatggctacaccagctttgatagcttt
ggctgggccttcctctctctcttcagactaatgactcaagactactgggagaatctctac
caacagactcttcgtgcttcagggaagacctacatgatcttctttgtgctggtcatcttt
ctgggctccttctaccttgtgaatctgatcctggctgtggtggccatggcctatgaggaa
cagaaccaggctaccattgcggaagctcagcagaaagaggaagagttccaggccatgctc
gagcagctcaagaaacaacaggctgatgcacaggcagtggctgcagggtatgacagtggg
gattttagtggaggaatgacagacacttcttccgaagcctccaaactcagttccaaaagt
gccaaagaacgacgcaaccggaagaagaagaggaagcagagagaagaggaggaggagaaa
ggagactgtgaaaaggtccacaattccgagtcagagagcagcattagaaggcccagcttc
aggttctcattagatggaaaccgactgccgtatgataggacgtacacatctcctcaccag
tctgtcctgagcatccagggttcagtcttcacgccgcgccgggacagcagagctagcatc
tttagttttcgtggccggctgggatcagagaacgactttgcagatgacgagcacagtgcg
tttgaggacacaggcagccagagaggctcgctgttcctgccacaccgctcagagcggctt
tacagtactgttagtaaaggcagcttgagcccacgcattctcctgcccaccaatggcaaa
gtgcgttgctctgtggactgcaatggtgtggtatcactcgtggccggacgctcgctgccc
agctcgcccgctggactgctgctgcccgaggtgaccatagataaagccactacagatgac
aatgaggatacacaagaggagtacaggatgagatatgactctcatcagccctcaccaggg
tacctggatgaccagatagccagacagagagctctgagtgtagccagtattatcaccaac
actatggaagagttggaggagtctaggcagaagtgccatccgtgttggtataggtttgcc
catacttttttaatctgggagtgcagtccaacatgggtgaaaataaagaaaacagttcac
atggttgtgatggacccattagtggatttgtccattactatctgtattgtaatgaataca
gtattcatggccatggagcatcaccccatggataaggatttcggtgcaatgcttgcagtg
ggaaactatgttttcacaggcatcttcacagctgagatgatcttcaagatcatagctttg
gacccttattattacttccaagaaggctggaacatatttgatagtatcattgtcagtctg
agtctcatggaacttgggttggccaacgtatctggaatgtctgttcttaggtcattccgg
ctgctgagggtctttaagctggcaaagtcatggcccactctaaacatgctgatcaagatc
attggcaactcgctgggtgccctcagcaacttgacacttgtcctggcaatcatcgtcttc
atctttgctgtggtgggcatgcagttgtttgggaagagctacaagataaacgtgatgaac
atctcaacagatgggagcctccctcgctggcacatgtgtgatttcttccactcgtttcta
attgtgttccgcgtactatgtggggagtggatcgagaccatgtgggactgcatggtggtt
tctggacagcccaagtgcctaattgtcttcctcatggtcatggtgatcggaaatcttgtg
gttctgaacctgttcctggccttgctgctcagctcctttagtgcagataacctggcagcc
acagatgatgacagtgaattgaacaacttacagattgctgtgggccgcatcgagagaggc
atcgctttccttaaggcttgtctgcgccgctactttcagagtgcctgcctcagaaggaga
aagaaaaaggcatcagaggaggatggactaaaaaacagcaagaagctgactgatatctcc
aatcataccacagtagagctgagcaaagacccaggatctatgaaaacagtagcaggagca
gacaacgactctgagaatttcattgtcaactctggcttgactgtcactgtgcccatagcc
actgcagagtctgacccagagtgccacaacatggaggatttcagcagctactcttctgac
atggaggaagataaagagaagctatcggtgatgagctcttctgagggcagcacagtggac
atcaggcccctgagggagggaggagagtcactggactttgagctggaagagtctatggat
ccagaggcctgcttcacagatggctgtgtacgcaggtttccgtgttgtcaggtgagtgtg
gagaagggcaggtggaagacatggtggaccgtcagacgtacctgttataggatagtggag
cacaactggtttgaatccttcatcatctttatgatcctgctcagcagtggagcactggca
tttgaagacatatacattgaggagtacaagagattgaagatggttttggaatatgcagat
aaagttttcacctacgtcttcatgttggagatgcttttgaaatggctagcttatggattt
gctaaatacttcaccaatgcctggtgctggctggacttccttattgtcgatgtctctctg
atcagtctggtggccaacgcccttgattgctcggagctcactgccatcaaatctctgcgt
acactgagggccctgagacctctccgagcactctcacgcttcgagggaatgagggtggtt
gtcaatgctcttcttggtgccattccctcaatcatgaatgtgctgctggtctgtctcatc
ttctggctcatcttcagcatcatgggtgtcaatctgtttgctggaaagttctatgagtgt
gtaaacataacctcaggagctcgctttaatgagacagaggtcacgaataaaacggagtgt
gagcaactaggcaataatactgcccgttggaaaaatctgaagattaactttgacaatgtt
ggagcaggatatctggccttgctgcaagtggctacgttcaagggctggatggacattatg
tatgcagcagtagattctcgcaatgtagatgaacagcccaagtatgaagcaaaccttgtt
atgtacatctactttgtaggcttcatcatatttggatccttcttcactttgaatctcttc
attggtgtcattattgacaacttcaaccagcagaagaaaaagtttggaggtcaggacatt
tttatgacagaggaacagaagaaatattacaatgctatgaagaaactgggctcaaagaag
ctgcaaaaaccaattccccggccagcaaacaagctccagggttttatctttgacattgtg
acaaatcaagcctttgacatctgcattatgattcttatatgccttaatatggtcacgatg
atggtggagacagaagatcagtcagaaagccagaaggcaattctttactggattaatctg
atcttcattgtgctattcacaatggaatgtgcgctgaagatgatctctcttcgacaatac
ttcttcacagttggctggaacatctttgactttgtagtggtcattctgtcaatagttggc
acctgtgtttctggggtcattgagtactttgtctcgccgacgttgttacgcgtcattcgg
cttgctcggatcggccggattcttcgccttatcaagggcgccaggggaatacgcaccctt
ctgtttgctttgatgatgtccctaccagctctgttcaacatcggccttctcctcttttta
gtcatgttcatctacgctatcttcggcatgtcgaacttcgcctatgtcaagaaggaagcc
ggcattgacgacatgtttaactttgagacgtttggcaacagcatgatctgtttgtttcag
atcaccacttctgcaggctgggattctctcctgtcaccgatcctcaataccaagcctcct
gactgtgaccctactaaggaacaccctggcagcaaagttaagggcgactgtggcagccca
tctgtaggcatcttcttctttgtgagctacatcattatatgctttttgatcgtggtgaac
atgtacatagctgtgatccttgaaaacttcagcgtggccacagaggagagcgcagagcca
ttaagcgaggatgactttgagatgttctacgaggtgtgggagaaatttgaccccaaggcc
acacagttcatggaatacaacaaattgtctgattttgctgatgctttggaccctcctctg
cgtatacccaagccgaataagatccagctgatcaacatggacctcccaatggtgagtggg
gaacgaatccactgcctggacatcttgtttgcttttacgaaacacgtcctcggggaaggc
ggtgagatggacgtccttcgcggacagatggaggaccgcttcatggcctccaacccatcc
aaagtgtcctacgagcccatcaccacaacactgcggcgcaaacaggaggacatgtcggct
gtcatcattcaaagagcctacaggacacacgttgtaagacacagtatgaaacaggcctcc
aacacgtacaaagacactccacaggagaacggaaaggtctcacacaaggactcagtggcc
agagacaactttaacaaccattccacttcagacaaaggtgacacaactccatccacagcc
ataccaccatcatatgacaacgtaacacagggtggcaaggacaaatatgagaaggacaaa
agggaaaaggaggtcaaaggaaaggataacaaggagcgaaagaaatga
DBGET
integrated database retrieval system
