Colossoma macropomum (tambaqui): 118806876
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Entry
118806876 CDS
T09004
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04120
Ubiquitin mediated proteolysis
cmao04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118806876 (syvn1)
04120 Ubiquitin mediated proteolysis
118806876 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118806876 (syvn1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118806876 (syvn1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118806876 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
118806876
NCBI-ProteinID:
XP_036424427
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPDISWVFHFRVVSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWENKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNPTPTPAAPAAPAAPAAPANA
PAPQAANVAPGMMPHFPPGLFPFWGPFPGAAPPAGPPGAQAANSTPQTSADATQTPGADA
GASSSSQPSTDDATTAPAAAVPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPASLSTM
SEEELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLSPPRSESSPGEVS
GSGRTESSASAGDTEASSQESGAQTIGPVNGATGFSQPNSTTAAEKEEKKEEEGGEDDGE
PNAAELRRRRLRKLETTPPPDH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagctctggtaacggctaccagcctggcactgaccggtgcggtggtcgcc
catgcctatttccttaagcaccagttttaccctacagtggtataccttaccaaaagcagc
cctagtatggcagttttatatatccaggcatttgtgttggtttttctgctgggaaagttt
atgcgaaaggtcttttttggacagttgagagctgcagagatggagcacctgattgagcgt
tcttggtacgcagtgacggagacctgcttagcctttacagtgttcagggatgacttttcc
cctcgttttgtggccctcttcactttgctgctcttccttaagtgcttccattggctggct
gaagacagagtggactttatggaaaggagtccagatatctcatgggtctttcattttaga
gttgtctccttaatggttttgctgggagtactagatttcttatttgtcaatcacgcctgc
catagcattattacaagaggagcctcagtgcagctggtctttggattcgagtatgcaatt
cttatgaccatggttctcaccaccttcattaagtacaccttgcatacaatcgacctacag
agtgagaacccatgggaaaataaagccgtctatatgctctatacggagctcttcacaggt
ttcatcaaagtgctgttgtacatggcgttcatgacaataatgatcaaagtgcacaccttc
cccctgtttgccattcggcctatgtatcttgcaatgaggcaatttaagaaggctgtgacg
gatgcaataatgtctcgacgagccattcgcaacatgaacactctctatccagatgccact
cctgaggacttgcaagcctctgacaatgtatgcatcatctgtcgagaggagatggttact
ggagccaagaaactgccctgcaaccacatctttcactcaagttgccttcgctcttggttc
cagaggcagcagacatgtccaacctgtcgtatggatgttctgcgagcatcacagcccaat
ccaactcctactccagctgctccagcagctcctgcagcccctgcagccccagctaatgct
cctgcaccccaagctgctaatgttgcgccaggtatgatgccacacttccccccaggtctc
ttccctttttggggtcccttccctggtgctgcaccccctgctggtccgccaggtgctcaa
gctgctaacagcactccacagaccagtgcagatgcaacccagactccaggggcagatgca
ggagctagtagctcaagtcagcccagtacagatgatgccaccactgctcctgcagctgca
gtgcctggattccccttttccatgcccccacctttcccgtctgcaccatggctgcccatg
cctccacctccaccctttatgtcgtccatgcctcctcctccggcgtctctatcgacaatg
tctgaggaagagctgagggaactggagcaggagggccggcgaggtctggaggctaggcta
cagtgccttcataatattcacacactgctggacgctgccatgctcaacatccaccactac
ctcaccactgttgccacgctcagccctcctcggtcagaaagcagccctggcgaggtcagc
ggatcagggagaactgagtcatctgcctcagcaggcgatactgaggcctctagccaggag
agtggtgcacaaactattggtcctgtgaatggagcaacaggcttttctcagccaaactca
accacagctgctgagaaggaagagaagaaggaggaagagggaggagaggatgacggagag
cccaacgctgcagagctaagacgaagacgtctgcgcaagctagagaccacgccgcctcct
gaccactga
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