Corynebacterium matruchotii: HBA49_01170
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Entry
HBA49_01170 CDS
T07153
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cmat
Corynebacterium matruchotii
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HBA49_01170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmat03021
]
HBA49_01170
Transcription machinery [BR:
cmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HBA49_01170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QIP44297
UniProt:
A0A6H9XRD5
LinkDB
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Position
complement(1125902..1127755)
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AA seq
617 aa
AA seq
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MIFPGERAYVAATENSDTSATARIGGSSTEGAASSGTPQPATKKVAKKTARKATARKAAP
RTATPATPEAPAAGVSAGESTTTAPAARRSAAKKTTTKKTAAKKSVAKKTTAKKTTRKAA
PKKAAATDATEVTAVADVAATADTPTAPAKKTAKKVTKKTAKKTTKKATKKTTRKTAAKK
TTAKKTAAKKTAAKKTAAKKTTRKAAVTAAKKQAVAPKSIKMDDDLIEDEDSLLEPDSDF
DLTNGLSNSDVDGYEDDQDAVIDPHLSDDDDAMPPVDEEDEDSSSVWDEDESAALRQARK
DAELTASADSVRAYLKQIGKVALLNAEQEVSLAKRIEAGLYADYRMKQMEKAYSNGDKEA
KLTPAVKRDLRAIARDGRKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRA
VEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLG
REPTPYELSKEMDITEDKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVIAVDAV
SFTLLQDQLQDVLHTLSEREAGVVKLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTM
SKLRHPSRSQVLRDYLD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatttttccaggcgaaagggcgtacgtggcagccactgagaattcagatacttccgca
accgcacgcattggcggcagctccaccgagggggcggcttcaagcggcactccacaaccg
gcaaccaagaaggttgcaaagaaaaccgcccgaaaggcaactgcccgcaaggcagcaccg
cgtaccgctaccccggccacgccggaggcaccagctgctggtgttagtgcgggagagtcc
accacgactgctcctgctgcgcgtcggtcagcggcgaagaagaccaccaccaagaaaacc
gcggcgaagaaaagtgtagcgaaaaaaaccacggcaaaaaagaccactcggaaagctgcc
cccaaaaaggcggctgcaactgatgctaccgaggtgacggcggtggctgatgtcgcagct
actgccgatacgccgacggcaccagccaagaaaactgcgaaaaaggtcacaaagaagacc
gcgaagaaaactaccaagaaggcgacgaagaaaaccacgcggaaaaccgcggccaagaag
accacggcaaaaaagactgccgcgaaaaagaccgcggccaagaaaaccgctgcgaagaaa
actacccgcaaggctgcggtgaccgccgcgaagaagcaagccgtggcgccgaagtcgatc
aagatggatgatgacctcattgaggatgaggattcattgctggagccggattccgacttt
gatttgaccaatgggttgagcaattccgatgtggacggctatgaggatgatcaggatgcg
gtcatagatccgcacctcagcgacgatgacgacgccatgccacccgtggacgaggaagat
gaagatagttcctcggtgtgggatgaggacgagtcggctgcgctgcggcaggcccggaag
gatgcggagcttaccgcgtcggcggattcggtgcgcgcctacctcaagcagatcggcaag
gttgcgttgctcaatgcggagcaggaggtgtcgctggcgaaacgcatcgaggcgggcctg
tatgcggactaccgcatgaagcagatggagaaggcctacagcaatggcgataaggaggca
aagctgacgcccgcggtgaagcgggatttgcgggccatcgcccgagatggccggaaggcg
aagaatcacctgttggaggccaacctacgactggtggtgtcgttggcgaagcggtacacg
ggtcgcggcatggcgtttctggatttgattcaggagggcaacctggggttgattcgtgcg
gtagagaagttcgactacaccaagggttataagttttccacctatgcgacgtggtggatc
cgccaggccatcacgcgcgccatggcggatcaggcgcggacgatccgtatcccggtgcac
atggtggaggttattaataagctcggccggattcagcgggaactgttgcaggatttaggc
cgggagcccacaccgtatgagctgtcaaaggaaatggacatcaccgaggataaggtattg
gaaatccagcaatacgccagggagccaatttcgctggaccagaccattggtgacgaggga
gattcccagctgggcgacttcattgaggattccgaggctgtgattgcggtggatgcggtg
tcgttcaccctgctgcaggaccagttgcaggacgtgttgcacaccttatccgagcgggag
gccggcgtggtgaagctgcgattcgggttgacggatggcatgccccgcaccctggacgag
atcggtcaggtgtatggggtgactcgggagcggattcggcagatcgagtcgaagaccatg
tcgaagctgcggcacccgtcgcggtcgcaggtactgcgggattacctcgactag
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