Cucurbita maxima (winter squash): 111484226
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Entry
111484226 CDS
T05246
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111484226
Transcription machinery [BR:
cmax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111484226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
HTH_24
Motif
Other DBs
NCBI-GeneID:
111484226
NCBI-ProteinID:
XP_022986506
UniProt:
A0A6J1J7Q5
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MMATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNF
SPRNQSSNRHVHCIKAAPSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSMLEKQWN
LSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTI
NSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQL
AISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLR
GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRLQEKG
ITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENN
PWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQI
GLVALEKLKKAAKTRKMEAMLLKH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacaacaactgcaataactgggcttggtgcagccaagaggctgttgaattct
tcgtcctattattctgatttcacagaaaaggttttgtatgccaatgaccacaggattgga
caaacccaggtttcccctacaaagagtgtggtaataacagcaagaagttcgcctaacttt
tctccgagaaatcagtcgtcgaatcggcacgtgcactgcatcaaagctgcaccttcttct
ccaactgcagagccagggcttcataatagcacaatctgggaagatgaagaaactgatctg
aaatgtactgtggaggttcttcttttgctgcaaaagtccatgttggagaagcaatggaat
ctatctttcgatcaaaccgtgttggccgatgcgccgagaggaaaaacacagaagaaagta
cctgtcacttgttctggtgtgtctgcacgacaaaggagaatgagttctaagaggaaaata
cagagcaaacatgttcttatggctcagccaagaatcagcaaacagttaaggcctaccatc
aattctgagctattacaaaatcgattaaaggggtatgtgaaaggtttattaagtgaagag
ctgctttctcatgctgaagttgtacgcctttcgaagaaaatcaaagtcggtcttgcattg
gaggagcgtaaaaccagactaaaggaaagattaggatgtgagccctctgaagaccaacta
gcaatatcactcaagatttcccgtgccaaattacggtcaagtgtaatggaatgttcatta
gcaagagagaagctagcaatgagcaatgttcgtttggttatgtctattgcgcaaagatac
gacaaaatgggggctgaaatggatgacttagttcagggtggcttaattggacttctccgt
gggattgagaagtttgattcttcaaaggggtttaaaatctcaacctatgtttattggtgg
atacgccagggtgtttcaagagcattagttgagaattcaagaatgctaagattgccgact
catatgcatgaaagattaggattgattcgcaacgctaaagttagactgcaagagaaagga
atcactccatcaattgataggattgcagaatccctaaacatgtccaaaaagaaagtcaag
aacgccacagaggcaataagcaaggtgttctcgctagaccgagaggcatttccttcatta
aatggtcttccaggcgaaactcatcatagttatattgcagataactgcctcgagaacaac
ccatggcatggaacggacatatggattctgaaggctgaggttaacaaactcataactacg
acacttgggaaccgagaaagagagataatacgcctttaccacggtctggataatgagtgt
ctgacatgggaggaaataagcaaacgcatagggttgtccagagaaagagtaagacaaatt
ggactagtggcgttggagaaactaaagaaggcagccaagacaaggaagatggaagccatg
ttgcttaaacattaa
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