Cucurbita maxima (winter squash): 111491186
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Entry
111491186 CDS
T05246
Name
(RefSeq) uncharacterized protein LOC111491186
KO
K18734
protein SMG8
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111491186
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111491186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Ferritin
Motif
Other DBs
NCBI-GeneID:
111491186
NCBI-ProteinID:
XP_022995746
UniProt:
A0A6J1JZU3
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Position
Unknown
AA seq
1229 aa
AA seq
DB search
MDMSNSSSVRVLVRPPPISTPTSSSASQTPLPSRTASPDPSTSLAPSSPSPSLSVPRFSD
GIVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVRDWFKRRRISYHHEEE
RGILFLQFSSHRGSVFDAEIDYDSAIEEHDFGDLQGMLFMFSVCHVIIYIQEGLRFDTNI
LKKFRALQSAKHVLTPFIKSRATPPLPSRLHSSSASRSVGSAAVSNNSSPIRSGSILTRN
ASGISVMSGLGSYTSLFPGQCTPVILFIFIDDFSDGPMASSNVEGIDTISINQSPSSDSI
SRPNLPVKGSGSVVVLARPVSKSEGGFRKKLQSSLEAQIRFLIKKCRTLSGSETSHAGSR
GGSASSSAPLFSLDSSKAVVLVDKSANRTAESLDFATSLVEDVLNGKATSDSLLLESHGQ
SASREDIVSLREFIYRQSDILRGRGGLVHSTSSGSAGGVGMVAVAAAAAAASAASGKAFT
TPELPSMEIWLSSSQQILQGILCAKGGCIDEVEISKRKPRHRHIPSALIEGNALKGLDPL
DIAVSWLESGKGLNMKFSTSWSERALPAAKEVYLRDLPACYPTSQHEAHLEKALLAFHSM
VKGPAVQHFAKRLEEECKSIWNSGRQLCDAVSLTGKPCMHQRHSTENGDSPSEAMQKTHS
SGYVFLHACACGRSRRLRSDPFDFEAANVTFNRFSDCDNFLPVFQLPGVSITGPIQPSSW
SLIRVGGAKYYEPSKGLLQSGFYPTQKFLFKWKINTRIRKTPNDLTENIMLRGSLVKSFM
DSKVEPNVNVNLKRADVAQLKSGDSQPGIDNERNSSENIAEDKKSISGRGLPNFTLRKPF
SEVVAGSSGPDVGFPPLQQRIHSSPGMDKGIKQNKDVNNYERGCVTVDNRGFKNSENIIS
LSKKSDEISGNEHSDSDSFLRIGTNVVPMNVNSLEKTKNTLLKQTLIYIGFEHECPHGHR
FLLNPEHLKELGSSYATIKKSHTPVQGAACNLAGPQRYGKSDCHGKSHDSVSSANATFSS
KERNLDKLKDAVSGGSMYSDDQSNCTRRMTSNNLTSVSATVSNSVKDLEKGVKYIGIEDN
GSGFFMLNRDLPIFMNCPHCKLSKNEKDPPNVKFSGMISQLQRIFVVTPPFPTVLATHPV
IQFEESCLPPSVPGRQQKLQFALGCQVVLPPESFLTLRLPFVYGVQLDDGSLHPLNPLQH
QPEATAWIIGGTTLQILSKSGSLDEGFQT
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtccaattcgtcctctgtgcgtgtacttgtccggccaccaccgatatcaaca
cccacttcctcttcagcatctcaaacgcctctcccttctcgtactgcctcacccgatccc
tctacttcattagctccttcgtcgccatctccgtcgctttctgttcctcgtttttccgac
ggtatcgttgttgtcggtttcattggcaggagacccgatgattcgatccagctcattaat
cgagttatcgattccaatgtgtttgggtccggtaaattggataaaaaattggatgtcgag
aaagaggaagttagagattggttcaagcggcgaagaattagttatcatcatgaggaggag
agaggcattctctttttgcagttttcttcccacaggggctctgtgttcgatgccgaaatc
gattatgattcggcgattgaagaacatgattttggggatcttcagggaatgctttttatg
ttctctgtctgccatgtaatcatatatattcaagaggggttgcggtttgatactaatatt
ttgaaaaaatttagagccctgcaatctgctaagcacgtattaactccatttataaaatct
cgagctacaccaccattgccatctaggctgcattcttcatctgcttcacgatctgttggt
tcagcagccgtgtctaacaactcttctcccattagaagtggttctatattaacacgcaat
gcttccggcatctctgtcatgtcaggtttaggttcatatacctcattgtttcctggacag
tgtactccagtcatactttttatttttattgatgacttctcagatggcccgatggctagt
tctaatgtggagggaatagatacaatatcaattaatcagtctccaagttcagacagtata
tccaggccaaatttaccagttaaaggttctggatctgtagttgtgcttgcccgtcctgtg
agcaaatcagaaggtggtttcaggaagaaattgcagtcatctcttgaagcacaaattcgc
tttctaatcaagaaatgtcgaacgctttctggttctgagaccagtcatgcagggtctaga
ggtggaagtgcctcaagttctgcacctttgttttcacttgattcatcaaaagccgttgtt
ctggtggacaagtctgcaaataggacggctgagtctctggactttgccacaagcctcgtg
gaagatgttttgaatggaaaagctacttcagattctcttctgcttgaaagtcatggtcaa
agtgctagcagagaggatatagtatctctaagggaatttatctatcggcagtcagacatt
ctaaggggtagaggggggctggtgcatagtacaagcagtggttcagctggtggggttggc
atggtcgctgttgctgctgctgcagctgctgcatcagcggcatctggaaaagcctttact
actcctgagcttcctagtatggaaatttggttgtcttcaagtcaacagattctccaggga
attctttgtgcaaaaggtggttgcatagatgaagtggaaatcagcaaacgaaaaccacgt
caccggcacattccttctgcgttgattgagggaaatgctttgaagggtctggatccttta
gatattgctgtatcttggttggaaagtggtaaaggtttaaatatgaagttttcaacttca
tggagtgaaagagcattaccagctgcaaaggaggtttatctaagagatttacctgcttgt
taccccacttcacagcatgaagcccacttagagaaggctttgcttgctttccattcaatg
gttaagggacctgcagtgcaacattttgccaaaaggttggaggaagaatgcaaatccatt
tggaattctgggaggcagctttgtgatgccgttagtctgacaggaaaaccatgtatgcat
caaagacatagcacagagaatggagattcaccttcagaagccatgcaaaaaactcattca
agtggatatgtcttcctacatgcttgtgcttgtggccgttcacgacgactacgatctgat
ccttttgattttgaagcagcaaatgtcactttcaaccgtttttctgactgtgacaatttt
cttccagttttccagttaccaggagtaagcataacaggacccattcagccatcatcatgg
tctctgattcgggttggtggtgcaaagtactacgaaccttcaaaaggtttactccagagt
ggtttctatcccactcaaaagttcctattcaaatggaaaattaataccagaataaggaag
actccaaatgatttaacggaaaatataatgctgcgtggctctttagttaagtcattcatg
gactctaaggttgaacctaatgtaaatgtaaacttgaagagggcagatgtagcacaactg
aagtcgggggattcacagcctgggattgataatgagagaaattcctcagaaaacatagct
gaagacaaaaaaagcataagtggcagaggtcttcccaactttaccctgcgaaaacctttt
tctgaggttgtagccggatcttcaggtccagatgttggatttccacctctccagcagagg
atacactcttcaccaggtatggataagggcatcaaacaaaataaggatgttaataattat
gaacgaggctgtgttaccgttgataaccgtggcttcaagaactctgaaaatattattagt
ctttcaaaaaaatcagatgagattagcggcaatgagcattcagatagtgactcctttctg
cggataggtactaatgtagttcctatgaacgtaaatagtcttgaaaaaacaaaaaacact
cttctgaagcaaacacttatatatattggctttgagcacgaatgccctcatggacaccgt
ttcttactaaaccccgagcatcttaaggaacttggatcatcatatgcaacaattaaaaaa
tctcatactcctgtgcaaggtgctgcatgcaatctagctggtcctcagagatatggtaaa
agtgattgtcatggtaaatctcatgatagtgttagttcagcaaatgcaacgttctcaagt
aaggagagaaatttagataagttaaaggatgcagtgagtggtggcagcatgtattcagat
gatcagtcaaactgcactagaaggatgacatcaaacaatctgacatctgttagtgcaact
gtttccaattctgtaaaagaccttgaaaaaggtgttaagtatattggcattgaggacaat
ggatctggttttttcatgttgaatcgggacctaccaattttcatgaactgcccacattgc
aagctctcaaagaatgagaaagatcccccaaatgttaagttctctggcatgatatctcaa
cttcaaaggattttcgtggtgacgcctccctttccaacagtgctggctacacatccagtg
atacaatttgaggagtcttgcctgcccccctctgttcctggacgacagcagaaactgcag
tttgcacttggatgtcaagtagtcttgccccccgagagttttctgacacttaggcttcca
tttgtttatggagtgcaactggatgatggaagtcttcaccctcttaaccctcttcagcat
caacctgaagcgactgcttggataattgggggcacaacattgcagatcctgtcaaagtct
ggcagtctggatgagggatttcaaacataa
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