KEGG   Cucurbita maxima (winter squash): 111493773
Entry
111493773         CDS       T05246                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111493773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111493773
Spliceosome [BR:cmax03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    111493773
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    111493773
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 111493773
NCBI-ProteinID: XP_022999384
UniProt: A0A6J1KGY3
LinkDB
Position
Unknown
AA seq 391 aa
MANRTDPAAKNIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRRKLADGCFSLTHMDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR
KSALEDDFEEEEEKEDVEPINDSLEGDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
RDRDIDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDREREGRERE
RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSVSPRRRNGVEDREEPKRKKEK
KEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcaaatcgtacggacccagctgcgaaaaacataagggggacgaatccgcagaacctg
gtggagaagattcttcgctccaagatctatcagaacaattactggaaggagcaatgtttt
ggtttgacggcggagacattggtcgacaaagccatggagctcgaccatctcggtggtaca
tatggtggcaaccgcaagcccacgccattcatgtgtctcgtcatgaagatgctccagatt
cagccggagaaggaaatcgtcatcgagttcattaagaacgaagactacaaatatgttcgg
gttcttggtgccttttacttgcgactcactgggactgatgttgatgtgtatcgttacctg
gagcccctgtacaacgattatcggaaattgaggagaaaattagctgatggatgtttttct
ttaacacacatggatgaagtcattgatgaacttcttacaaaagattattcatgtgacatt
gctctgccacgtgtcaaaaagagatggacccttgaatctagtggttcactgcctgcaagg
aaaagtgctttagaagatgactttgaggaggaggaagaaaaagaggatgttgagccaatc
aatgattctttggaaggtgatattcatgaaaagaattattatcgagggagaagtcctgtg
cgggagagggacagagacagaaggcgtgatagtcacagacacagggaccgagattatgaa
agagaccgggatattgatagagatcggggtcgtggaagggaaagagatagagatcgagaa
agggatcgggatagggacagggatagagacagagatagggatagggatcgctatcacctt
agggatgagaaggaatatggcagggatcgagatagggaaagagaaggcagggagagggag
agggagagggagaggcgtgacagagatcgtggtcggagaaggagccattcaaggagtcga
agtaggagtaaagatcgagaggatggggagtaccggaagagacacacccgtagcagcgtt
agtcctagaagaaggaacggggtggaggatagagaggagccgaagaggaagaaggaaaag
aaagagaagaagggagacggggcaggcgaggaagaccccgaaatcgcagaatggaacaga
attcgtgcttctcttggaatggcacctctgaagtag

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