Cucurbita maxima (winter squash): 111493773
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Entry
111493773 CDS
T05246
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111493773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111493773
Spliceosome [BR:
cmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111493773
Complex C
U4/U6.U5 tri-SnRNP related factors
111493773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
111493773
NCBI-ProteinID:
XP_022999384
UniProt:
A0A6J1KGY3
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MANRTDPAAKNIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRRKLADGCFSLTHMDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR
KSALEDDFEEEEEKEDVEPINDSLEGDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
RDRDIDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDREREGRERE
RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSVSPRRRNGVEDREEPKRKKEK
KEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgtacggacccagctgcgaaaaacataagggggacgaatccgcagaacctg
gtggagaagattcttcgctccaagatctatcagaacaattactggaaggagcaatgtttt
ggtttgacggcggagacattggtcgacaaagccatggagctcgaccatctcggtggtaca
tatggtggcaaccgcaagcccacgccattcatgtgtctcgtcatgaagatgctccagatt
cagccggagaaggaaatcgtcatcgagttcattaagaacgaagactacaaatatgttcgg
gttcttggtgccttttacttgcgactcactgggactgatgttgatgtgtatcgttacctg
gagcccctgtacaacgattatcggaaattgaggagaaaattagctgatggatgtttttct
ttaacacacatggatgaagtcattgatgaacttcttacaaaagattattcatgtgacatt
gctctgccacgtgtcaaaaagagatggacccttgaatctagtggttcactgcctgcaagg
aaaagtgctttagaagatgactttgaggaggaggaagaaaaagaggatgttgagccaatc
aatgattctttggaaggtgatattcatgaaaagaattattatcgagggagaagtcctgtg
cgggagagggacagagacagaaggcgtgatagtcacagacacagggaccgagattatgaa
agagaccgggatattgatagagatcggggtcgtggaagggaaagagatagagatcgagaa
agggatcgggatagggacagggatagagacagagatagggatagggatcgctatcacctt
agggatgagaaggaatatggcagggatcgagatagggaaagagaaggcagggagagggag
agggagagggagaggcgtgacagagatcgtggtcggagaaggagccattcaaggagtcga
agtaggagtaaagatcgagaggatggggagtaccggaagagacacacccgtagcagcgtt
agtcctagaagaaggaacggggtggaggatagagaggagccgaagaggaagaaggaaaag
aaagagaagaagggagacggggcaggcgaggaagaccccgaaatcgcagaatggaacaga
attcgtgcttctcttggaatggcacctctgaagtag
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