Corynebacterium maris: B841_02380
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Entry
B841_02380 CDS
T02784
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cmd
Corynebacterium maris
Pathway
cmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B841_02380 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmd03021
]
B841_02380 (rpoB)
03400 DNA repair and recombination proteins [BR:
cmd03400
]
B841_02380 (rpoB)
Enzymes [BR:
cmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B841_02380 (rpoB)
Transcription machinery [BR:
cmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B841_02380 (rpoB)
DNA repair and recombination proteins [BR:
cmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B841_02380 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGS33959
UniProt:
S5SS66
LinkDB
All DBs
Position
507421..510912
Genome browser
AA seq
1163 aa
AA seq
DB search
MLEGPILAVSRQTKSVADIPGAPKRYSFAKISEPIAVPGLLDVQLDSFSWLVGAPEWRAR
QQEEHGDDARITSGLEDILHELSPIQDYSGNMSLSLSEPRFEPVKYSVDECKEKDMNYSA
QLYVTAEFVNNETQEIKSQTVFIGDFPLMTDGGTFIVNGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHAVKVIPSRGAWLEFDVDKKDTVGVRIDRKRRQPVTVLLKALGWTNEQITER
FGFSELMMSTLESDGINNTDEALLEIYRKQRPGEQPTRDLAQSLIENAFFRPKRYDLAKV
GRYKINRKLGLGGDHEGETTLTEEDIATTIEYLVRLHSGEREMTSPIGEVVSVGTDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQGNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLSSYARVNAFGFIETPYRKVENGKVTDQVDYLAADEEDRFSIAQAEVAQDADG
NIVEERIEVRVKDGDIAVTDAQGVDYIDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQ
KQAVPLLRPQSAFVGTGMELRAAYDAGDMVISPKAGVVENVSADVITIMDDEGQRDSYLL
RKFERTNQNTSYNQKPLVSLGERVEAGQIIADGPGTHQGEMALGRNLLVAFMAWEGHNYE
DAIILNQSVVEDDTLTSIHIEEHEIDARDTKLGAEEITRDLPNVSEEVLKDLDDRGIVRI
GADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLRVPHGETGKVIGVSR
FSREDDDDLSPGVNEMIRIYVAQKRKIQDGDKMAGRHGNKGVVGKILPPEDMPFMADGTP
VDIILNTHGVPRRMNIGQVLEIHLGWLAHTGWTVDPTNPENAELVKTLPEELYEVPAESL
TATPVFDGASNEEIAGLLANSNPNRDGDVMVDGDGKTQLFDGRSGEPFKHPISIGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLTADGTAMDLDDDE
DEDETTSLGINLSRDERADTDIA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtggccgacatcccc
ggagctccgaagcgatactctttcgctaaaatctcggagcctattgctgtcccggggctc
ctcgacgttcagctcgactccttttcatggctcgtaggtgcgcccgagtggcgcgcccgc
cagcaagaggagcacggcgacgacgcccgtatcacgagcggactcgaggatattcttcat
gaactgagcccgattcaagattactcgggcaacatgtccctttccctttccgagccgcgc
tttgagccggtgaagtactcggtcgacgagtgcaaggaaaaggacatgaactactccgcg
cagctgtacgtgaccgcggagttcgtcaacaacgaaacccaggagatcaagtcccagacc
gtcttcatcggcgatttcccgctgatgaccgacggcggaactttcatcgtcaacggcacc
gagcgtgtcgtcgtctctcagctggttcgttccccgggcgtctacttcgaccagaccatc
gacaagtccacggagcgtccgctccatgccgtcaaggtcatcccgtcgcgtggcgcctgg
ctcgaattcgacgtcgacaagaaggacaccgtcggcgtccgcatcgaccgtaagcgccgc
cagccggtcaccgtgctgctgaaggcgctgggctggaccaacgagcagatcacggagcgc
ttcggcttctccgagctcatgatgtccaccctggagtccgacggcatcaacaacaccgac
gaggcgctgctggagatctaccgcaagcagcgtccgggcgagcagccgacccgcgatctc
gcgcagtcgctgatcgagaacgccttcttccgcccgaagcgctatgacctggccaaggtc
ggccgctacaagatcaaccgcaagctcggcctgggcggcgatcacgagggcgagacgacc
ctgaccgaagaggacatcgccaccaccatcgagtacctggtgcgtctgcactccggtgag
cgcgagatgacctcgcccatcggagaggtcgtgtccgtcggcaccgacgacatcgaccac
ttcggcaaccgtcgtctgcgcaccgtcggcgaactgatccagaaccaggtccgcgtgggc
ctgtcgcgcatggagcgggtcgtgcgtgagcgcatgaccacccaggacgccgagtcgatc
accccgacgtcgctgatcaacgtgcgtccggtctccgccgcgatccgcgagttcttcggc
acctcccagctgtcgcagttcatggaccagggcaactccctgtccggcctgacccacaag
cgccgtctgtcggcgctgggcccgggcggcctgtcgcgtgagcgcgccggcatcgaggtg
cgcgacgtccacccgtcgcactacggccgcatgtgcccgatcgagaccccggaaggcccg
aacatcggcctgatcggttcgctgtcgtcctacgcgcgcgtcaacgccttcggtttcatc
gaaaccccgtaccgcaaggtcgaaaacggcaaggtcaccgaccaggtcgactacctggcc
gccgatgaggaggatcgcttctccatcgcgcaggccgaggtcgcccaggacgccgacgga
aacatcgtcgaagagcgcatcgaggtccgcgtcaaggacggcgacatcgccgtcaccgac
gcccagggcgtcgactacatcgacgtgtccccgcgccagatggtctccgtgggcaccgcc
atgattccgttcctggagcatgacgacgccaaccgtgccctgatgggcgccaacatgcag
aagcaggccgtgccgctgctgcgtccgcagtccgcgttcgtgggcaccggcatggagctg
cgcgccgcctacgacgccggcgacatggtcatctccccgaaggccggcgtcgtcgagaac
gtctccgccgacgtgatcacgatcatggacgacgagggtcagcgcgactcctacctgctg
cgcaagttcgagcgcaccaaccagaacaccagctacaaccagaagccgctggtcagcctg
ggtgagcgtgtcgaggccggtcagatcatcgctgacggcccgggcacccaccagggcgag
atggcgctggggcgcaatctgctcgtcgccttcatggcgtgggaaggccacaactacgag
gacgccatcatcctcaaccagtccgtggtcgaagacgacaccctgacctcgatccacatc
gaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggaaatcacccgcgac
ctcccgaacgtctccgaggaagtcctcaaggacctcgacgaccgcggcatcgtgcgcatc
ggcgccgacgtccgcgacggcgacatcctcgtcggcaaggtcaccccgaagggcgagacc
gagctgaccccggaagagcgtctgctgcgcgccatcttcggcgagaaggcccgcgaggtg
cgcgacacctccctgcgcgtgccgcacggcgagaccggcaaggtcatcggcgtctcccgc
ttctcccgcgaggacgacgacgacctgtccccgggcgtcaacgagatgatccgcatctac
gtcgcccagaagcgcaagatccaggacggcgacaagatggccggccgccacggcaacaag
ggcgtcgtcggcaagatcctgccgccggaggacatgcccttcatggcggacggcaccccg
gtcgacatcatcctgaacacccacggcgtcccgcgtcgtatgaacatcggccaggtcctc
gagatccacctgggctggctggcgcacaccggctggaccgtcgatccgacgaacccggag
aacgccgagctggtcaagaccctgccggaggagctctacgaggtcccggccgagtcgctg
accgccaccccggtgttcgacggcgcctccaacgaggagatcgccggcctgctggccaac
tcgaacccgaaccgcgacggcgacgtcatggtcgacggcgacggcaagacgcagctgttc
gacggccgctccggcgagccgttcaagcacccgatctccatcggctacatgtacatgctc
aagctgcaccacctggtcgacgagaagatccacgcccgctccaccggcccgtactccatg
atcacccagcagccgctgggcggtaaggcgcagttcggcggccagcgcttcggcgagatg
gaggtgtgggccatgcaggcgtacggcgccgcctacaccctgcaggagctgctcaccatc
aagtcggacgacgtggtcggccgcgtgaaggtctacgaggcgatcgtcaagggcgacaac
atcccggatccgggcatccccgagtccttcaaggtgctgctcaaggagctgcagtcgctc
tgcctgaacgtggaggtcttgactgcggacggcaccgccatggatctcgacgacgatgag
gacgaggacgagacgacgtcgctgggcatcaacctgtcccgcgacgagcgcgccgacacc
gacatcgcttaa
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integrated database retrieval system
