Cyanidioschyzon merolae: CYME_CMM309C
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Entry
CYME_CMM309C CDS
T00175
Name
(RefSeq) similar to WD-repeat protein aladin
KO
K14320
aladin
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CYME_CMM309C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMM309C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CYME_CMM309C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
ANAPC4_WD40
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
16994950
NCBI-ProteinID:
XP_005537168
UniProt:
M1VE21
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Position
13:784682..786283
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AA seq
533 aa
AA seq
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MELAVSSVHGTGEVGRQPTPWRAPRTHASASGRSAPDAEPLPPLERITERDAPATGPGRE
LGTSCWSEPGYDAVSPQRLGLPRLPPLKVASASQSTVEQSSHTLVAASSRSTLAYGNVFR
QSVHPERTSTWSRTLSNALEKLLVPRQLQKQQTRTTALAGSLVGMRGTQPGKIALADDWV
LLAIITGDDAVYCYRIDREHDTWTCTAVLRTRLVRSVTCLAFRPCMTQSWMLAAGCERGV
ALWTADAQSAGAAGPAPRSAETAPASVAHAPLYVCFQLLETWGHHHVSSVAWSADGHMLA
SSTCSDSAVLVWQVGAGSYQALYRIRGGVEHLCWSPSLEDAGVLLSIAHRGSVVRIWSTN
PDGEWVSTAWDRPRLDPDLLAWHVKVQVGRDSHRRHYLIGADFTKSLLWCWTLEFQTHAS
LRPLATFRMPGEPQKLAWDPTGQRLAISFKEPLRFPVQSKTGDPDAADRAPVALYVTEME
PTVQVSLTGFVRAPESNAQVIDLRWHPQGPRRALALLVISWSNQQVTFYPYVL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgccgtttccagtgtgcatggcacaggggaagtcggccggcagccgactccc
tggcgggcacctcgtacacacgccagcgcttcgggacgatcggcaccagacgctgagccg
ctgccgcctctggaacggatcaccgaaagagatgctcccgccactggaccaggtcgagag
ctcgggacgagttgttggagcgaacctggctatgatgctgtctctccgcaacgcctgggc
ctacctcgactgccaccgctcaaggtcgcctcggcttcgcagtcgactgttgagcagtct
agccatacgctagttgctgcttcctctaggtcaaccctggcatatggtaacgtgttccgc
caatctgtgcacccagagaggacgtcaacctggagtcgcacgctttccaacgctcttgag
aagctgctcgttccgcggcagctgcagaagcagcagactaggacaactgcactggccggc
tcacttgtgggtatgcgtggcacgcagccgggcaagatagcacttgctgatgactgggtg
ctcttggcgatcatcactggcgacgatgcggtctactgttatcgaatcgaccgggagcac
gatacctggacgtgtaccgcagtgctgcgtacgcgcctcgtgcgctccgtcacttgtcta
gcgtttcgcccttgcatgacacagagctggatgcttgctgctggttgtgaacgtggtgta
gctctgtggactgctgatgcgcagtcggccggggctgctggtccagcaccacgctcggca
gagacggcaccggcgtctgtggcacacgcaccgttgtacgtttgctttcagttgttggag
acatgggggcatcatcatgtttccagtgtcgcttggagtgcagacggccacatgctcgct
tcgagtacctgctccgatagtgccgtcctcgtgtggcaagtcggagccggctcctaccaa
gctctctatcgtatccggggcggcgtcgagcatctctgttggagtccatcactggaagat
gccggtgtccttttgagtattgctcatagaggaagcgtggtacggatctggagcacgaac
ccggatggtgaatgggtcagtaccgcgtgggatcgaccgcgccttgatccagatcttctg
gcatggcatgtgaaagtgcaagtcggaagagacagccacagacgacactatctcatcggt
gcggattttaccaagtcgctgctttggtgctggacgctcgagttccagacgcatgcttcg
cttcgaccacttgctacgttcaggatgccgggagaaccacaaaagctggcctgggatccc
actggtcaacggcttgcaattagtttcaaggagccgctgcgttttccggtgcagtccaaa
acgggcgaccctgatgctgcggacagagcacctgttgcgctgtacgtcaccgagatggag
ccgacggtacaggtcagccttacgggttttgttcgcgcacctgagtcgaatgctcaagtg
atcgatttgcgatggcatccgcagggcccaaggcgtgcgctcgcgctcctcgtcattagc
tggagcaatcagcaggtcaccttctatccctatgttttataa
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