Cyanidioschyzon merolae: CYME_CMQ149C Help Entry CYME_CMQ149C      CDS       T00175                                  Name (RefSeq) RNA helicase   KO K18663   activating signal cointegrator complex subunit 3 [EC:5.6.2.4] Organism cme  Cyanidioschyzon merolae Brite KEGG Orthology (KO) [BR:cme00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cme03400]     CYME_CMQ149C Enzymes [BR:cme01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      CYME_CMQ149C DNA repair and recombination proteins [BR:cme03400]  Eukaryotic type   SSBR (single strand breaks repair)    Direct repair     CYME_CMQ149C BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sec63 DEAD Helicase_C ResIII AAA_22 AAA_19 Motif Other DBs NCBI-GeneID:  16996604 NCBI-ProteinID:  XP_005538089 UniProt:  M1VKK8 LinkDB All DBs Position 17:359070..364646 Genome browser AA seq 1858 aa AA seqDB search MSDPFRNKPNARATVEQDDLKAVNAFFRTLGHVSCDPSAIVDIGHSLLSLLESSLTDVDL ESDLFDLIGNPEVAAELLKLRPSVQRHSSSIRAELTGSYGRERTKKTKQQSPEKFLPSSS LSGLQYSSPFEAKGRTRTDSATHGGAFRQRAPFLSGSVTSTTSATADSIQELSPDFPGSD NPFVAKPTYPAPKSSNIEFRSEELYKEIFVPPPQPCSAAQQRLKVAECLDPPLRRIFEHT EHFNPVQSTVFSAVYHTSENLLICAPTGAGKTNIALLAIGREILHRMHERAWRCVYIAPM RALASEIVRKLANSLRSLSVEVLEYTGDTNPTLPSLRRSQVLVTTPEKWDVLSRNSAHWQ SGLAASIRLLVIDEIHLLHDNRGPVLEAVVARTLRLAEIQQTRVRIVGLSATLPNYVDIS AFLRVTPEKGLFYFDASYRPVPLGQRLIGMRKRRDRGSESALIEVCYEKARSFVTCGHQV IIFVHSRKKTKLLAEDLLKMARERNEASLFVQSERSQDQLPRTIRSADLRMLLMHGVGIH HAGLARSDRIATETHFRDGSITLLVSTATLAWGVNLPARAVIIYGTKIYDASRGGFVDIG VLDILQIFGRAGRPEYDSYGEGIILTEEQRLPFFYRLLSVQMPIESQMLNGFALVDHLNA EIATGHVTSEHEALAWLACLYLSVRLAKNPLHYGIAWEDVQRDPTLSAFKYQLLKKSIDA LVIAGLVSVDSELSQLEPTDWGIVASRFYVSHQTMQIFKENLRQDASASQVIRCISSSSE FENLALREEEIPELETLYADACPYEYPRHANIAIRSKLEDESEYFLNGYTGKVYILLQSY ISRATVHDFALLSDMRYIEESATRLFGAVFEIALRQGWPELARNASELARAVERRLWPFE HPLTQMQNVQASVVDLIKNRNIPHDIQILRRLSNEQWTDLLGSPSHVQIMAEIVSEFPYL EVSGHLSALAEQLFRIQISCTPCWKWGSRLHSTRTSEAARYTLMINDVDAGVMVYSQSVT FSKKQVQERETSFFEIYLSHGGQWPQTFEAVFLSEEWLGADQKYVLQTDAPGPPQSQLIR TPLLNLRLLGREALGFGLGAACDTLFPGLSHLNPIQTQICHSVLHSDASLFIGMPPNAGK DLVLLLCILRQLRAKRSAHCRVLYLSLASNNMDDMDACLRRWLSVLDVRLLDLSDGCKAG IHDPMVVCCVTPKQLLDWLLDKTESAIAFFDSVDLVLVDNMHHLNEDNGVLAESALVAVR AVTRRSTRLVAFGNLIGNAMDLASWLSTSRMYNFALEHSPTPIAFSVIPFRERNIAERFA RMDQTIRKIVQHHNAEQVIVLVQSDRECIETARRLLHVAAADGTSHRAGIEGHLLDVSVL NADIGQFLAFGIGVLVGEMNNVLQSLMQDLFSARKLSWLAVAFPLLDELRCSAPVVVVKG TEWHLTAGGTWKHLSPSVLLKILQRCGCQEIQRGSFYLLASESRKAYFQKLLECEVPVEA GIRTEEDLGLFLCQMVAGDLVSEPEESFQLTRETYLSRRLAQNPSWYPWVTANDNEMRTV VETSLLRMASIGLLRIQASSSAVLTLEPTTLGKLACFFSLRPIFFERINNLLSEMNQEKR EQKAHDLAHEDHACMPDSCKVEDSIPDAAKESDNGPATQVIPYNVVRFETAARELLYIGL REIAPHCSSMELAVAAAVVAAEKGFDPAVSPLLRFAKVERKEHRRSSHARPTPRIALNVS SVERVQLNWIQVSLCFRKIELEGINRTQPERIYASALPASCPVTKLVCFAFSAVTEELLG YGISEETVLHVDLELRRHIPAGGKLKLKLFCFPVELTHEIGVSLSDEQMSASSSTRKQ NT seq 5577 nt NT seq  +upstreamnt  +downstreamnt atgagtgatccgttccgaaacaagccaaatgcaagagcaactgttgaacaagacgatttg aaagcagtgaacgctttcttccgtacgcttggtcacgtctcgtgcgatccgagtgcgatc gttgacatcggacattcgttactctctcttctagagagttccctgacagacgtggattta gaaagtgaccttttcgatctcatagggaatccagaggttgccgcggagctcctcaaacta cgtccaagcgttcaaaggcacagtagctccataagagcagaactaactggcagctatgga cgagaacgaacaaaaaagacgaagcagcagagtccggagaagtttctacccagttcgagt ctgagcggcttacaatattcttctcccttcgaagcaaaaggcagaactcgcacggatagt gccacccatggcggggcgttcaggcaacgagctccttttttatccggctcggttacctca accacgtccgcgactgcagactccatccaagagctctcgccagactttcccggcagcgac aatcctttcgttgctaagcctacatatcccgcaccgaaatcaagcaacatcgagttccgg tcagaggagctttataaggaaatctttgtaccgccaccgcagccttgctctgcggcccag cagcggttgaaggttgcggaatgtttggaccctccgttgcgaagaattttcgagcacaca gagcatttcaaccctgtacagagcaccgtgttttctgcggtctaccacacgagcgagaac ctgctcatctgtgcgccaaccggagctggcaagacaaatatcgcacttctggctattggg agggagattctccaccgaatgcatgagcgtgcatggcgttgcgtgtatatcgcacccatg cgtgctctggcctcggagatcgtgcggaagcttgcgaactcgctgagatcgctatccgtc gaagtgttggaatacaccggggatacgaatccgacgcttcctagcttgagacgaagtcag gtgttagtgaccactcccgagaaatgggacgttctctcacgaaatagtgcgcattggcaa tcggggctcgctgcttcgattcgtttgctcgtcattgatgagatccaccttctacacgat aatcgaggtccggtactcgaagctgtggttgcaagaacgttacgcttagcggaaattcag caaacgagagttcgcatcgtcggattgtcagcaacgctgccgaattatgtggatatctcg gcgttcctccgggtgactcccgaaaaagggcttttttacttcgacgctagctatcgacct gtccccttgggtcaacgcctcattggaatgcgaaaaaggcgagatcgaggttccgagtct gcccttatcgaggtctgttacgaaaaagctcgctcattcgttacatgtgggcaccaggtc atcatctttgtccactcacgaaagaagaccaaactccttgccgaggacctgctgaagatg gcacgggagcggaacgaggcgtctcttttcgtacagtcagagcgcagccaagatcaattg cctagaacgattcgatcagcggacctgcggatgctcttaatgcatggcgttggtattcac cacgctggtctcgctcgttcagatcgcatcgcgaccgagacgcacttccgagatgggtcg atcactttgttggtaagcacagccactctcgcatggggtgtcaatctgcctgccagggcc gtcatcatctacggcacgaaaatctatgatgcaagtcgcgggggttttgttgacattggc gtcctcgatattttacagattttcggaagagcaggtcggccggaatacgacagctatgga gaaggaatcatactgacggaagagcaacgtcttccgtttttctaccgactcctcagcgtc cagatgccgatcgagagtcagatgttgaacgggttcgctcttgttgatcatctgaatgcc gaaatcgccacggggcacgtcacgtcggagcacgaagccctggcgtggctggcatgtctg tacctttcggtacgccttgccaagaatccacttcattatggtattgcttgggaagacgtg cagcgagatccaacgctctcagcttttaaatatcagctgctgaagaaatcgattgatgct cttgttatagcgggcctcgtttctgttgatagcgagctgtcgcagctggaaccaacagac tggggcatcgtagcgagtagattttacgtatcgcaccaaacgatgcagatcttcaaagag aatctgagacaggatgcgtctgcgagtcaagtgattcgatgcatcagctcgtcatcagaa ttcgaaaatttggccttacgagaagaagaaatccctgaactggaaaccctctatgctgac gcctgcccatatgaatatccgcggcatgcaaacatcgcgattagatccaaattagaggat gagtcggaatatttcttgaatggctacacaggcaaggtatacattcttcttcagtcatat atatcacgagctactgtgcatgattttgcattgctttcagacatgcgatatatcgaggag tcagcaacaagactcttcggtgcagtatttgagattgctctccgtcaaggctggcctgaa cttgctcgaaacgccagtgagttggcgcgagccgttgagcgacgtctctggccttttgaa catccccttacacaaatgcagaacgttcaagcctctgttgtggaccttatcaagaacagg aatataccgcatgatattcagattttgcgaagactatcgaacgagcaatggacggattta cttggttcaccttctcacgtgcaaatcatggcagaaatagtgtcggagtttccgtactta gaggtatctggtcacctgtccgcgctggcggagcagctctttcgtatccaaataagctgc acaccgtgctggaagtggggatcccggctacacagtacacgcacgagcgaagctgcacgg tacacgctcatgatcaacgatgtggatgcgggtgtaatggtctattctcagagtgtcaca ttctcgaagaagcaagttcaagagcgcgagacatcatttttcgaaatttatctgagccat ggcggtcaatggccacaaacatttgaagcggtgttcctgtcggaggagtggctcggggca gaccagaaatacgtcctccaaacagatgcccctggtccgccacagagccagctaatacgg acgccacttctgaacctgcgcctgctgggccgggaggcactcggattcggcctcggtgca gcgtgcgacacattatttccaggtctgtcgcatctcaacccgatccagacgcaaatttgc cacagcgttttgcactcggacgcgagcttgttcattgggatgccaccgaacgctgggaag gatcttgtgctgttactgtgcatcctgcgtcaactacgcgccaagcgcagtgcccactgc cgagtgctctacctcagtcttgcttcgaataatatggatgacatggacgcatgtctccgc aggtggctctccgtgttggatgttcgcctgcttgacctgagcgatggctgcaaggcaggg attcatgacccaatggtcgtctgttgcgtgacgcccaagcagctgctcgactggctcctc gataaaacagagtcagcgattgcgttctttgacagtgtggatcttgtgctggtcgacaac atgcaccacttgaacgaggacaatggtgtactcgctgagagtgctctagttgccgtgcgt gccgttactcgaagatcgacgcgactggttgcctttgggaatctcattggtaacgcaatg gatctggcttcatggctatctacaagtcgtatgtacaatttcgcactggagcatagccct acgccgatagcgtttagtgtgatccctttccgagagcggaacatcgcagaacgttttgcg cgaatggatcaaaccattcgtaagatcgttcaacatcacaacgcggagcaagttattgtg ttggtgcagtcggatagggaatgcatcgagaccgctcgtcggctgctgcacgtggctgca gctgacgggacatcccatagagcgggcatagaaggacatctactagatgtttctgttctg aatgcggatattggccagttccttgctttcgggatcggtgttctggtaggtgaaatgaat aacgtgcttcagagcctcatgcaagatcttttctcagcccggaaactttcatggttagcc gtagcttttccacttctagatgagctgcgatgcagtgcaccagttgttgttgtgaaaggc acggagtggcaccttacagctggcggaacatggaagcatttgagtccaagcgtactattg aaaatcctgcaacgctgcggttgccaggaaatacaacgcggttcattttacctcctcgct tcagaatcgcgcaaggcatactttcagaagctactagaatgtgaagttcccgtcgaggca ggcattcgcactgaggaagaccttggcttgtttctgtgtcagatggttgcaggcgatctt gtgtcggagccagaggagagctttcagctgacgcgggaaacgtatctttcgcggcgtctg gcccagaatccgagctggtatccctgggtaaccgcgaacgacaatgaaatgcgaacagtt gtggaaacgtctctcttgaggatggccagcattggtctccttagaatccaagcgagtagc tcagcggtgctaaccctcgaaccaaccacgcttggtaagctggcttgtttcttctctctg agaccaatttttttcgaacgcattaacaatttactgagtgagatgaatcaagaaaaacgc gagcagaaagcccatgatttggcgcatgaagaccatgcttgtatgcccgattcttgcaaa gtggaggattcgattccagacgctgcaaaggaaagcgacaatggcccggcgacccaagtg attccatataatgtcgtccgcttcgagacggccgccagagaactgctctacataggtctg cgcgagatagcaccgcactgctcgagcatggagctggcggtggcggcggcagtcgtagcg gctgaaaagggttttgatccagccgtgtcccccttgctaagattcgctaaggtagaacgg aaggagcacaggcgaagctcccatgcgcgcccaacccctcgaattgcgctgaacgttagc agcgttgaacgtgttcagctgaactggatccaggtgagtctttgctttcggaaaatcgag ctggaaggcatcaacaggactcagcccgaacgcatatacgcatcggcactacctgcttcc tgcccggttaccaaattggtctgcttcgcattttctgctgtgactgaagaactcttggga tatgggatttcggaagaaactgttctccacgtagatcttgaactacggcgacatattccc gctggtggcaaactcaagctgaagcttttctgttttccggtggagctgacgcatgaaata ggtgtgagcttgagcgacgagcaaatgagcgcgtcgtcttccaccagaaagcagtaa

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