KEGG   Cyanidioschyzon merolae: CYME_CMQ406C
Entry
CYME_CMQ406C      CDS       T00175                                 
Name
(RefSeq) similar to splicing factor 3a, subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CYME_CMQ406C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cme03041]
    CYME_CMQ406C
Spliceosome [BR:cme03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CYME_CMQ406C
 Complex B
    CYME_CMQ406C
 Complex C
   U2 SnRNP specific factors
    CYME_CMQ406C
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3
Other DBs
NCBI-GeneID: 16996433
NCBI-ProteinID: XP_005538285
UniProt: M1VAR9
LinkDB
Position
17:1056126..1057742
AA seq 538 aa
MNALTALDSALNEFEQLASEWCTLVRLLEAAELARVRVERGEWAPWWNARRIVLTRLARR
WSRHLASKSTAACVTSLRSLQQSVVPSSRPAVTATSTNEGLIATLRQKAREPLSPLSAPL
LGDTVEELPLMEADLDLDFTSAEVSGLCLDLQEVYRSYLSLLPPLIASQLPYLRFLEILE
ALPRSNELRALVVFRRLDGRCLPPECLDASALEAACQKLSPGCRNAYAGWLLDVLRYLVE
FARRAMPWLSPAHWDRMRSTGRKIPSIVRTKREAEALNTPRPTKAILRIASASADQRPDH
DSMPSSKHSTHVDTVNTPVDVWLGQELDQSVAPNLADIETLEQHLASLVTDDECGIFRAS
LLRTIRHVERQQVQTLTEWMFTNRVEQVTREDLATERSGQWFLRAGPPDADASNTTGIKI
NKSTAVTSKEETENFPGWLRRAFALHQVYRCEICDPVQTYYGPLAYERHFRSAVHVRGLH
RLGVYYTADWDYIDTVADALRLKAHLAKLNDSGQVGIVAVEREADGAPMEASTGSSRT
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgaacgcgctcaccgctttggattcagcattgaacgagtttgagcagctagcaagtgag
tggtgcaccctagtgagactcttagaggcggctgaacttgcgcgtgtccgcgtagagcgt
ggtgagtgggcgccctggtggaatgcccgccgtatcgtccttacccggctggctcggcgc
tggagtcggcacttggcttccaaaagcactgcagcgtgcgttactagcctccgttcgctt
cagcagagcgtcgttccgagtagccgacccgctgtgactgcaacaagcaccaacgaaggt
ttgatcgcaacgctcaggcagaaagcacgagaaccgctgtcacccctctctgcaccgctg
ctcggtgatactgtcgaagaactgcccctgatggaagcggacttggacttggatttcacc
tcggcagaagtctcggggctctgtttagacttacaagaagtctatcgatcgtacctttcg
cttcttccgccattgatagcgagccagttaccgtatcttcgttttcttgagatcctcgag
gcgctgcctcgttccaatgaactgcgtgcactggttgtgtttcgaagactcgatggcagg
tgtctcccgccagagtgtttagatgcctctgcgctcgaagctgcatgtcaaaaattgtcc
ccgggttgccgcaatgcgtatgccgggtggctccttgacgtcctccgctatttggtcgag
tttgcgaggcgcgccatgccatggctctccccagcacactgggacaggatgcggagcact
gggcgaaaaataccttcgattgtccggaccaagcgagaagcagaggcgctgaatacaccg
cgacctacaaaagcgatactccggatcgcaagtgcaagtgcagaccagcgacccgatcac
gatagcatgccctcatcgaagcactccacacatgtggataccgtgaacactcctgtcgac
gtttggctcggtcaagagctcgatcagagcgttgcccccaacctggccgatatcgagacg
cttgagcaacatctcgcatcgcttgttacagatgatgagtgcggcattttcagggccagt
ttattgcgaacgattcgacacgttgagcgccagcaagtccaaacactgacagaatggatg
tttacgaatcgtgtggagcaggtgacacgcgaagacctcgcaacggagcgtagcgggcaa
tggttcctccgagctggaccaccagacgcagatgcatcgaacacaacgggaatcaagatc
aacaagtccacagctgtgacttccaaggaggaaaccgagaatttcccgggctggttacga
cgtgcttttgcgcttcatcaggtttatcgttgcgagatctgcgatcctgtccagacatat
tatggaccgctggcttatgagcgtcactttcgatcggctgtgcatgtgcgcggtctccat
cgtttgggcgtttactataccgcagactgggattatattgatactgtggctgatgcgctg
cgactcaaagcacatctcgcgaagctgaatgattcgggtcaggtgggcatcgtcgctgtc
gagcgggaagcggatggcgcgcccatggaggctagcactggatccagtcgtacgtaa

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