Cyanidioschyzon merolae: CYME_CMT635C
Help
Entry
CYME_CMT635C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYME_CMT635C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMT635C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CYME_CMT635C
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CYME_CMT635C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
16997979
NCBI-ProteinID:
XP_005539565
UniProt:
M1VD34
LinkDB
All DBs
Position
20:complement(1613001..1613975)
Genome browser
AA seq
324 aa
AA seq
DB search
MPTELSRTEKKSLIWLFKEHGLRVDGRSALRSRSVSVAVDVLPSTAGSSRVFVGRTNDVL
VGINLELRQYNLPAHAEDDAKRGSIAFSVEFCGVASPEFQGRSTEVLEAELVSFLDTAYA
ASPEFLADLFCREQRLASDPGTLRVCCWDVYVDVLVLGASGGNILDAVTYAVRAALATTV
VPSVYWQDSESGGSWELDDRAEYCALLNASNAPLSASGAFIPPLVRDSRTEHDQVTLVAP
RWFIIDPCAEEETLAGCFLSVASDSAQHLRAIWKRGSLPVEPDVVLDAAQQCIRDSAYAC
QEMDHFISELVATEESESVDDVPG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgaactgtctagaactgagaagaaaagtcttatatggttgttcaaggagcat
ggtctaagagttgacggacgcagtgcgcttcgatcgcgctctgtgagcgttgctgttgat
gtgctgccctccacagcgggctccagtcgagtgttcgtcggtcggactaacgacgtactc
gtcggtataaacctggagctgaggcaatacaatttgccagctcatgcggaagatgacgcc
aaacgtggctcgatcgcgttttctgtggagttctgcggagtcgcaagtcccgagtttcaa
ggacgctccactgaggtgcttgaggcagagctcgtctcgtttctagatactgcctacgca
gcttctcctgagtttttagcagacctcttctgcagggaacagcggctagcttcggatccg
ggtacgctccgggtgtgctgctgggacgtgtacgtggacgtactggtgctcggggcctcg
gggggtaacattctcgatgccgtgacctacgctgtgagggcagcactggcaacaaccgtt
gtcccgtccgtgtattggcaggacagtgaaagcggtggaagctgggaactggatgaccgg
gcagagtactgcgctctcctgaatgcctcgaacgctccgctgagcgctagtggggctttt
attccgcctctggtacgcgactcgcgcacagagcatgatcaggtgactttggtcgccccg
cggtggtttataatcgatccgtgcgctgaggaggagacgctggcgggctgtttcctttct
gtggccagtgacagcgcgcagcacctgcgagcgatatggaagcgcggctccttgcccgtg
gagcccgacgtggtactcgacgccgcgcagcagtgcataagagatagcgcctacgcctgt
caggagatggatcatttcatcagcgaacttgtggcaacagaagaatcagaatctgtagat
gatgtgccaggatag
DBGET
integrated database retrieval system