Cyanidioschyzon merolae: CymeCp184 Help Entry CymeCp184         CDS       T00175                                  Symbol rpoB Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism cme  Cyanidioschyzon merolae Pathway cme03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cme00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CymeCp184 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cme03021]     CymeCp184 (rpoB)    03400 DNA repair and recombination proteins [BR:cme03400]     CymeCp184 (rpoB) Enzymes [BR:cme01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CymeCp184 (rpoB) Transcription machinery [BR:cme03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      CymeCp184 (rpoB) DNA repair and recombination proteins [BR:cme03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       CymeCp184 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF5774 RnfC_N Motif Other DBs NCBI-GeneID:  844995 NCBI-ProteinID:  NP_849116 UniProt:  Q85FR7 LinkDB All DBs Position CP:128375..131485 Genome browser AA seq 1036 aa AA seqDB search MRDLIAVQRNSYYTFLTKSLKEEFDKISPIVDYTGQLELHLITSKMELKPPKITPVQAKR QDITYSVGMYMPVQLWNHQTGDVRQQMIYFGEIPLMTEDATFIINGAERVVVNQIVRSPG VYFQALWDKQHVRTFEATFMANRGAWIKYELDKQKLLWVRLDKNRKMPLVIFLQALGLNL QEIKPHLTNREVFERSWENHAVNNTEAALVEFYKKMRPGEPATVHSAKQLLYARFFDPKK YDLSEVGRYKLNQKLHLDIPLSVHILTTSDLLAGLDYLIQLCLDRARVDDIDHLANRRLK CVGELLQNQVRIGLSRLEKLLREKMTIGEKLQPSSLLNPKPLTSAIREFFASSQLSQFMD QINPLAELTHKRRISALGAGGLTRERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLA IFARVNRYGFIETPYYPVKKGQVQKSIVYLTADVEDNYRLAPADVKYDREGQICSPIVAV RYRQEWTTCDASHVDYMAISPIQFISAATCLIPFLEHDDANRALMGSNMQRQAVPLIRAS KPYVSTGQEKWMVQGVFSKADGIVRSVQATSIRIQHARGPVDYALLKYQKSNQDTCIDYR PLVWVGEHVVKGQLIAQSAAMDSGELALGQNVLIAYMPWEGYNFEDAFVISERLVYEDVY TSIHIEKYETDARQTKLGAEQITRQIPNVGEHALRQLDEHGIISVGSWVEAGSILVGKIT PKGESDQPPEGKLLRAIFGEKNQHVKDSSLRMPNGSRGRVIHVRILSRDQGDELPAGVNI SVRVSVAVKRVIQVGDKMAGRHGNKGIVARILPRCDMPYLPDGTPVDVILNPLGVPSRMN VGQLFEALLGLAAHRLRKRIKIVPFDEMYHKEASRIFVHQQLKRAALSAQTILYDGRSGE KFDNAVTVGMAYMLKLVHLVDEKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALE AYGAAYTLQELLTLKSDDMEGRTATLNAIVKAQPIPRGGTPESFKVLMRELQALGLDVTV LQLESQALCVMQSKLD NT seq 3111 nt NT seq  +upstreamnt  +downstreamnt atgagagatctcatagccgttcaacgcaatagttattatactttcctcaccaaatcgctt aaagaagaattcgataagatatctcctattgttgattatacaggtcaattggaactgcat ttgatcacttcaaaaatggaattaaaacctccgaagatcacaccagtgcaagcaaaaagg caagatataacctattctgtgggcatgtatatgcctgtgcaattatggaaccatcaaaca ggagacgttagacaacaaatgatctattttggcgaaattcctttaatgacggaagatgcc acttttatcatcaatggggctgagcgcgttgttgtcaatcaaattgttcgttctcctggt gtatattttcaagcactctgggataaacaacatgtgcgtacttttgaagccactttcatg gccaaccgaggtgcttggatcaaatacgaattagataagcaaaaacttttatgggttcgt ctggataagaatcgtaaaatgcctttagttatctttttacaagcgcttggtctaaattta caagaaattaagcctcatttaacgaaccgggaagtgtttgaacgtagttgggaaaatcat gcagttaataacactgaagcagctttagtagaattttataaaaagatgcgtccaggtgaa cccgccaccgttcacagtgctaagcaattgctttatgcacgtttttttgaccctaaaaaa tatgacttatcagaagtaggtcgatacaaacttaatcaaaaactgcatttggacattcct ttgtcggtgcatatccttacaacttcagatttgctagctggtctcgattatcttattcaa ttgtgtcttgatcgtgctcgagtagatgatatcgaccatttagctaatcgacgtttaaaa tgcgtaggcgaattattacaaaatcaagtgcgtataggtttaagtcgcttagaaaaatta ctccgagaaaaaatgaccataggcgagaaattacaaccttccagcttacttaatcctaaa cccttgacttcagctatcagggaatttttcgcttcttcgcaattatctcaattcatggat caaattaatcctttggcagaactaacccataaacgtcgtattagtgcacttggtgctggt ggtcttactcgcgaacgcgcaggttttgctgtacgtgatattcatccgagtcattatggt agaatttgccctatagaaactccagaaggtcctaatgcaggtcttattggttctttagct atttttgcacgtgtcaatcgctatggatttatagaaactccttattatccagttaaaaaa ggtcaagtacaaaaatccattgtgtatttaacagcggatgtggaagataactatcgttta gcaccagctgacgtcaagtatgatcgtgaaggccaaatttgttcaccaattgtagctgta cgttatagacaagaatggactacatgtgatgcatcacatgttgattatatggccatttca cctattcaatttatttctgctgctacttgtttaattccctttttagaacatgatgatgcc aatagggctttaatgggttccaatatgcagcgtcaagctgtacctttaattagagcctcc aaaccttatgtgagtacgggccaagaaaaatggatggtacagggtgtcttcagcaaagca gatggtattgtacgttctgtccaagctacttctatccgtattcaacatgcgcgtggtccc gtagattatgcgctgcttaaatatcagaaatcaaatcaagatacatgtattgattatcgt cccttagtctgggtaggggaacatgttgtcaaaggtcaattaattgcacaatcagctgcc atggatagtggcgagttggctttaggtcaaaatgtgcttatcgcttatatgccttgggaa ggttataacttcgaagatgcttttgttataagcgaacgacttgtatatgaagatgtctat acttcgattcacattgaaaaatatgagactgatgcacgacaaaccaaattgggtgctgaa cagattacgcgtcaaattcctaatgtaggtgaacatgcgttacgtcaattagatgaacat gggattattagcgtaggttcttgggtcgaagcaggtagcatcttggtaggcaaaatcaca cctaaaggagaatcagatcaacctccagaaggcaaattattacgtgccatttttggtgaa aaaaatcaacatgtgaaagatagcagtttacgaatgcctaatggttctcgtggtcgtgtt attcatgtacgtatcttaagtcgagatcaaggtgatgaattgccggcaggggtgaacatt agtgtacgtgtgagtgtggccgtgaagcgtgtaatccaagtaggagataaaatggcagga cgtcatggaaacaaaggtattgtggctagaatcttgcctcgatgtgatatgccttattta cctgatggtactccggtggatgtgattttgaatcctttgggtgtaccttcaagaatgaat gtgggacaattattcgaggctttgttaggtttagctgctcatcgtttacgaaaacgaatc aaaattgtacctttcgatgaaatgtatcataaagaagcttcgcgtatttttgtacatcaa caactcaaacgtgctgctttatctgcacaaaccattctttatgacggtcgttctggtgaa aaatttgataatgcagttactgttggtatggcctacatgttaaaacttgtgcatttagta gatgaaaaaattcacgcgcgttctactggtccttattctttggtcacacaacaaccatta ggtggtcgtgcccaacatggtggtcaacgcttaggtgaaatggaagtatgggctttagaa gcttatggtgctgcctatactttacaagaattattaactttgaaatcggatgatatggaa ggacgtacagctacacttaatgctattgtgaaagctcaaccaattcctagaggtggaact cctgagtcttttaaagttttaatgagagaattacaagccttaggtctagatgtcaccgtt ttacaattagaatctcaagctctatgtgtgatgcaatccaaattagattag

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