Clavibacter michiganensis subsp. insidiosus: VO01_12970
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Entry
VO01_12970 CDS
T03862
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00260
Glycine, serine and threonine metabolism
cmh00460
Cyanoamino acid metabolism
cmh00630
Glyoxylate and dicarboxylate metabolism
cmh00670
One carbon pool by folate
cmh00680
Methane metabolism
cmh01100
Metabolic pathways
cmh01110
Biosynthesis of secondary metabolites
cmh01120
Microbial metabolism in diverse environments
cmh01200
Carbon metabolism
cmh01230
Biosynthesis of amino acids
cmh01240
Biosynthesis of cofactors
cmh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VO01_12970
09102 Energy metabolism
00680 Methane metabolism
VO01_12970
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VO01_12970
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VO01_12970
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VO01_12970
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VO01_12970
Enzymes [BR:
cmh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VO01_12970
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJW79913
UniProt:
A0A0D5CJU5
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Position
complement(2748099..2749376)
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AA seq
425 aa
AA seq
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MPVDQSFNAPLSEVDPEIAAVLEQELGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAE
GYPGRRYYGGCEFVDVAEQLAIDRAKSLFGAEFANVQPHSGATANAAVLAAIAQPGDTIL
GLELAHGGHLTHGMKLNFSGKLYDAAAYGVDPDTFLIDMDVVREKALEHRPQVIIAGWSA
YPRHLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGVHPSPIPYADVVSSTVHKTLAGPRS
GVILSRDTALAKKLNSAVFPGQQGGPLMHVIAAKATAFKIAATEEFADRQRRTIQGAQIL
AERLVAADSTEAGVSVLTGGTDVHLVLADLRNSPIDGKQAEDALHEVGITVNRNSVPFDP
RPPMVTSGVRIGTSALATRGFGETEFTEVADIIAETLKPGSDLAALRARVLTLTDGFPLY
EGLTQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgaccagtcattcaacgcccccctctccgaggtcgacccggagatcgcggcc
gtcctcgagcaggagctcggccgtcagcgcggcaccctcgagatgatcgccagcgagaac
ttcgtgccgcgcgcggtgctgcagtcgcagggatccgtgctcaccaacaagtacgcggag
ggctacccgggccgccgctactacggcggctgcgagttcgtcgacgtcgccgagcagctc
gccatcgaccgcgccaagagcctcttcggcgccgagttcgccaacgtccagccgcactcg
ggcgccaccgcgaacgccgccgtcctcgcggccatcgcgcagccgggcgacacgatcctc
ggcctcgagctcgcgcacggcggccacctcacgcacggcatgaagctcaacttctccggc
aagctctacgacgccgccgcgtacggcgtggatcccgacaccttcctcatcgacatggac
gtcgtgcgcgagaaggcgctcgagcaccgcccgcaggtcatcatcgccggctggtcggcg
tacccccgccacctcgacttcgccgcgttccgctccatcgccgacgaggtgggcgccaag
ctctgggtcgacatggcgcacttcgccggcctcgtcgccgcgggcgtccacccctcgccg
atcccctacgcggacgtcgtctcctccaccgtgcacaagaccctcgcgggaccccggtcc
ggcgtgatcctcagccgcgacaccgcgctcgccaagaagctcaactcggccgtgttcccg
ggccagcagggcggcccgctcatgcacgtcatcgcggccaaggccaccgcgttcaagatc
gcggccaccgaggagttcgccgaccggcagcgccgcaccatccagggcgcgcagatcctc
gccgagcgcctcgtcgcggccgactccaccgaggccggcgtctcggtgctcacgggcggc
accgacgtgcacctcgtgctcgccgacctgcggaactcgcccatcgacggcaagcaggcg
gaggacgcgctgcacgaggtcggcatcacggtcaaccgcaactcggtgccgttcgacccg
cgcccgccgatggtcacgtccggtgtccgcatcggcacgtccgcgctcgcgacccgcggc
ttcggcgagaccgagttcaccgaggtggccgacatcatcgccgagaccctgaagcccggc
agcgacctcgccgcgctgcgtgcgcgcgtgctgacgctcaccgacggcttcccgctctac
gagggcctcacccagtga
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